RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 HOXD8P13378 290 aaPredicted RBP18.22■□□□□ 0.51
SSR4-201ENST00000320857 SMPD1P17405 629 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 SMYD5Q6GMV2 418 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 SPOPLQ6IQ16 392 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 CCNI2Q6ZMN8 369 aaPredicted RBP18.22■□□□□ 0.51
SSR4-201ENST00000320857 RASGEF1CQ8N431 466 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 FAM212AQ96EL1 285 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.512e-8■□□□□ 8.3
SSR4-201ENST00000320857 UVRAGQ9P2Y5 699 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 PCDHB4Q9Y5E5 795 aa18.22■□□□□ 0.51
SSR4-201ENST00000320857 H3BRB1 525 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 IL18RAPO95256 599 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 MMP3P08254 477 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 HOXC6P09630 235 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 ACO1P21399 889 aaKnown RBP18.21■□□□□ 0.51
SSR4-201ENST00000320857 PLA2G4AP47712 749 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 TNFAIP2Q03169 654 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 DGKDQ16760 1214 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 PTPROQ16827 1216 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 ZNF653Q96CK0 615 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 ZBTB10Q96DT7 871 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 TRIM11Q96F44 468 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 ZNF668Q96K58 619 aaPredicted RBP18.21■□□□□ 0.51
SSR4-201ENST00000320857 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
SSR4-201ENST00000320857 STIM2Q9P246 746 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
SSR4-201ENST00000320857 MIF4GDA9UHW6 222 aaKnown RBP18.2■□□□□ 0.5
SSR4-201ENST00000320857 ZEB2O60315 1214 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 TNNC2P02585 160 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 MAP2K2P36507 400 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 PPFIA1Q13136 1202 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 CLUL1Q15846 466 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 MTHFD1LQ6UB35 978 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 TRIM72Q6ZMU5 477 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 THNSL1Q8IYQ7 743 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 DNAJC5GQ8N7S2 189 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 RPS6KC1Q96S38 1066 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 RPF1Q9H9Y2 349 aaKnown RBP18.2■□□□□ 0.5
SSR4-201ENST00000320857 IFT122Q9HBG6 1241 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
SSR4-201ENST00000320857 CNTN6Q9UQ52 1028 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
SSR4-201ENST00000320857 DDX3YO15523 660 aaKnown RBP18.19■□□□□ 0.5
SSR4-201ENST00000320857 B4GALT5O43286 388 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 B4GALT4O60513 344 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 ASS1P00966 412 aaKnown RBP18.19■□□□□ 0.5
SSR4-201ENST00000320857 TMEM191BP0C7N4 346 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 MYBL1P10243 752 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 RNASE9P60153 205 aaKnown RBP18.19■□□□□ 0.5
SSR4-201ENST00000320857 GPS2Q13227 327 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 TRPC3Q13507 836 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 SGSM1Q2NKQ1 1148 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 EEF1DP3Q658K8 133 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 PPP1R2P3Q6NXS1 205 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 USP6NLQ92738 828 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 ANKRD36BP1Q96IX9 119 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 MTMR12Q9C0I1 747 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 CDT1Q9H211 546 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 ACBD3Q9H3P7 528 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 MINDY3Q9H8M7 445 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 ZFYVE28Q9HCC9 887 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
SSR4-201ENST00000320857 ALG6Q9Y672 507 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 DOCK3Q8IZD9 2030 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 CEP350Q5VT06 3117 aa18.19■□□□□ 0.5
SSR4-201ENST00000320857 A0A087WZ62 844 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 A0A0U1RQG5 324 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 CCDC188H7C350 402 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 ZMYND10O75800 440 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 MCF2P10911 925 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 TNFRSF8P28908 595 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 TM4SF4P48230 202 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 POU5F1Q01860 360 aaKnown RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 GRIK4Q16099 956 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 KYAT1Q16773 422 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 TMEM270Q6UE05 265 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 UBL4BQ8N7F7 174 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 RBBP8NLQ8NC74 664 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 ZNF564Q8TBZ8 553 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 HDAC7Q8WUI4 952 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 KRT12Q99456 494 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 NAP1L3Q99457 506 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 FDXACB1Q9BRP7 624 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 NUP85Q9BW27 656 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 CARD9Q9H257 536 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 DMGDHQ9UI17 866 aaKnown RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 FAM170AA1A519 330 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 RRN3P2A6NIE6 340 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 UNGP13051 313 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 GNA15P30679 374 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 TFAMQ00059 246 aaKnown RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 CASP8Q14790 479 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 IFT20Q8IY31 132 aa18.18■□□□□ 0.5
SSR4-201ENST00000320857 AVENQ9NQS1 362 aaPredicted RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 CNOT8Q9UFF9 292 aaKnown RBP18.18■□□□□ 0.5
SSR4-201ENST00000320857 TMEM110-MUSTN1A8MSY1 372 aa18.17■□□□□ 0.5
SSR4-201ENST00000320857 CST3P01034 146 aaPredicted RBP18.17■□□□□ 0.5
SSR4-201ENST00000320857 CYP1A1P04798 512 aaPredicted RBP18.17■□□□□ 0.5
SSR4-201ENST00000320857 TNNT3P45378 269 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms