RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TMX4Q9H1E5 349 aaPredicted RBP20.33■□□□□ 0.84
RTN4-201ENST00000317610 USP21Q9UK80 565 aa20.33■□□□□ 0.84
RTN4-201ENST00000317610 RRM1P23921 792 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 GCNT1Q02742 428 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 FAM160B2Q86V87 743 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 MAP4K3Q8IVH8 894 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 ANKRD35Q8N283 1001 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 CCDC89Q8N998 374 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 CNKSR1Q969H4 720 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 AGO4Q9HCK5 861 aaKnown RBP20.32■□□□□ 0.84
RTN4-201ENST00000317610 ADAM22Q9P0K1 906 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 TBX20Q9UMR3 447 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 YWHABP31946 246 aaKnown RBP20.32■□□□□ 0.84
RTN4-201ENST00000317610 LACTBP83111 547 aaPredicted RBP20.32■□□□□ 0.84
RTN4-201ENST00000317610 IL9RQ01113 521 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 ENPEPQ07075 957 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 NAA25Q14CX7 972 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 SAAL1Q96ER3 474 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 ZNF570Q96NI8 536 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.32■□□□□ 0.84
RTN4-201ENST00000317610 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
RTN4-201ENST00000317610 ECE2O60344 883 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 WDR4P57081 412 aaKnown RBP20.31■□□□□ 0.84
RTN4-201ENST00000317610 SPP2Q13103 211 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 IZUMO3Q5VZ72 239 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 CEP128Q6ZU80 1094 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 TMEM161BQ8NDZ6 487 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 GPRC5CQ9NQ84 441 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 TOPORSQ9NS56 1045 aaPredicted RBP20.31■□□□□ 0.84
RTN4-201ENST00000317610 SLC5A4Q9NY91 659 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 PKD2L1Q9P0L9 805 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 TBK1Q9UHD2 729 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 TRIM33Q9UPN9 1127 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 STARD13Q9Y3M8 1113 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 UMODL1Q5DID0 1318 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 FAM47DPA6NHR8 397 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 PSTPIP1O43586 416 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 PROSCO94903 275 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 RALAP11233 206 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 KLRC2P26717 231 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 NR1H3Q13133 447 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 RGS9BPQ6ZS82 235 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 SEPT14Q6ZU15 432 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 ZNF677Q86XU0 584 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 PITPNM3Q9BZ71 974 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 UBN1Q9NPG3 1134 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 TXLNGQ9NUQ3 528 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 UBIAD1Q9Y5Z9 338 aa20.31■□□□□ 0.84
RTN4-201ENST00000317610 ASTN2O75129 1339 aaPredicted RBP20.31■□□□□ 0.84
RTN4-201ENST00000317610 DIAPH2O60879 1101 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 ZC3H11AO75152 810 aaKnown RBP eCLIP20.3■□□□□ 0.841e-32■■■■□ 22.5
RTN4-201ENST00000317610 ASMTLO95671 621 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 CNGA1P29973 690 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 SLC18A1P54219 525 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 PARP6Q2NL67 630 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 ZNF365Q70YC5 407 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 SV2AQ7L0J3 742 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 ERICH1Q86X53 443 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 C4orf19Q8IY42 314 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 ZCCHC9Q8N567 271 aaKnown RBP20.3■□□□□ 0.84
RTN4-201ENST00000317610 FBF1Q8TES7 1133 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 FAXDC2Q96IV6 333 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 RAB3IPQ96QF0 476 aaPredicted RBP20.3■□□□□ 0.84
RTN4-201ENST00000317610 COL20A1Q9P218 1284 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 STK38LQ9Y2H1 464 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 VPS41P49754 854 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 ATP11AP98196 1134 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 CYP24A1Q07973 514 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 TKFCQ3LXA3 575 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 TDRPQ86YL5 185 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 IL31RAQ8NI17 732 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 MASTLQ96GX5 879 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 C9orf72Q96LT7 481 aa20.3■□□□□ 0.84
RTN4-201ENST00000317610 RASA4BC9J798 803 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 RASA4O43374 803 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 ATP5HO75947 161 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 CYP1A1P04798 512 aaPredicted RBP20.29■□□□□ 0.84
RTN4-201ENST00000317610 FDX1P10109 184 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 KRT5P13647 590 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
RTN4-201ENST00000317610 LMNB2Q03252 620 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 BZW1Q7L1Q6 419 aaKnown RBP20.29■□□□□ 0.84
RTN4-201ENST00000317610 USP37Q86T82 979 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 TRABD2AQ86V40 505 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 KATNAL2Q8IYT4 538 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 DENND1AQ8TEH3 1009 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 UTP4Q969X6 686 aaKnown RBP20.29■□□□□ 0.84
RTN4-201ENST00000317610 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
RTN4-201ENST00000317610 PRPF4O43172 522 aaKnown RBP eCLIP20.28■□□□□ 0.84
RTN4-201ENST00000317610 GCAP28676 217 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 MAGEA4P43358 317 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
RTN4-201ENST00000317610 UGCGQ16739 394 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 MON1BQ7L1V2 547 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 PRMT6Q96LA8 375 aaPredicted RBP20.28■□□□□ 0.84
RTN4-201ENST00000317610 ANKRD27Q96NW4 1050 aa20.28■□□□□ 0.84
RTN4-201ENST00000317610 LRMDAQ9H2I8 198 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms