RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 PLEKHO2Q8TD55 490 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 AMACRQ9UHK6 382 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 AKR1B15C9JRZ8 316 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 DNM1LO00429 736 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 MYCLP12524 364 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 SPP2Q13103 211 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CYLC2Q14093 348 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 MFSD14BQ5SR56 506 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 TRIML2Q8N7C3 387 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 FAM110BQ8TC76 370 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CNOT6LQ96LI5 555 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 NUP58Q9BVL2 599 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 LSM14BQ9BX40 385 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 AGXT2Q9BYV1 514 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PHACTR1Q9C0D0 580 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 OSBPL5Q9H0X9 879 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 PCDHGB4Q9UN71 923 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PCDHGB5Q9Y5G0 923 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 AHDC1Q5TGY3 1603 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 STRCP1A6NGW2 1772 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 YDJCA8MPS7 323 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 DNAJC6O75061 913 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 LDHAP00338 332 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 FGFR1P11362 822 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 MARK3P27448 753 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 DCAF17Q5H9S7 520 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 THOC7Q6I9Y2 204 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 CDC42EP5Q6NZY7 148 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CCDC197Q8NCU1 140 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 EPS8L3Q8TE67 593 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 GORASP1Q9BQQ3 440 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 KCNK9Q9NPC2 374 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 GMPR2Q9P2T1 348 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 UMODL1Q5DID0 1318 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 RTL9Q8NET4 1388 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PI4K2BG5E9Z4 385 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 KRT86O43790 486 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 RHOBTB1O94844 696 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 HSPA1AP0DMV8 641 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 HSPA1BP0DMV9 641 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 SERPINB3P29508 390 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 RILPL1Q5EBL4 403 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 ATG14Q6ZNE5 492 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CYFIP1Q7L576 1253 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 MAIP1Q8WWC4 291 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CARD9Q9H257 536 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 KRT82Q9NSB4 513 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 FAM8A1Q9UBU6 413 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 ADAMTS1Q9UHI8 967 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 DLEC1Q9Y238 1755 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 A0A087X0T9 212 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 ZNF233A6NK53 670 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 MMP10P09238 476 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 FAM228BP0C875 321 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 NFKBIAP25963 317 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CCR10P46092 362 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 HIC1Q14526 733 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 EXOC3L4Q17RC7 722 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 NLRP9Q7RTR0 991 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 VPS52Q8N1B4 723 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 EFHD2Q96C19 240 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 CCDC124Q96CT7 223 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 L2HGDHQ9H9P8 463 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 AASDHPPTQ9NRN7 309 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 TANC1Q9C0D5 1861 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 ERVV-2B6SEH9 535 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 THAP12O43422 761 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 GFPT2O94808 682 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 KRT20P35900 424 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 MTTPP55157 894 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 GUCY2DQ02846 1103 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 BRDTQ58F21 947 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 SIAH1Q8IUQ4 282 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 TRIM47Q96LD4 638 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 TMEM237Q96Q45 408 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 NAPGQ99747 312 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 GRID1Q9ULK0 1009 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CD2APQ9Y5K6 639 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 RBM47A0AV96 593 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 KLRF2D3W0D1 207 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 AP3B1O00203 1094 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 FAM155BO75949 473 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 LDHBP07195 334 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 RASA1P20936 1047 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 KRT2P35908 639 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 MRPS15P82914 257 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 MRPS9P82933 396 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 ZNF394Q53GI3 561 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PLA2G4FQ68DD2 849 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CPNE9Q8IYJ1 553 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 FBXL16Q8N461 479 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 TBC1D16Q8TBP0 767 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 NUDT8Q8WV74 236 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 UBXN6Q9BZV1 441 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PPCSQ9HAB8 311 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 BDP1A6H8Y1 2624 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CDHR2Q9BYE9 1310 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 KLHL33A6NCF5 533 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms