RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 DDHD2O94830 711 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 AFPP02771 609 aaKnown RBP16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 KRT19P08727 400 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 CYP3A5P20815 502 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 GTF2H1P32780 548 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 OR1G1P47890 313 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 MXI1P50539 228 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 PPP3CAQ08209 521 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 KRT31Q15323 416 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 ZBTB6Q15916 424 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 C1orf220Q5T0J3 134 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 ZNF516Q92618 1163 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 NRDE2Q9H7Z3 1164 aa16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 RC3H2Q9HBD1 1191 aaKnown RBP16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 MRPL42Q9Y6G3 142 aaKnown RBP16.98■□□□□ 0.31
TUBA3E-201ENST00000312988 N4BP1O75113 896 aaKnown RBP16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 SERPINC1P01008 464 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 ITGB3P05106 788 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 CLDN10P78369 228 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 TRPC3Q13507 836 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 NAB2Q15742 525 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 SV2AQ7L0J3 742 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 TMEM130Q8N3G9 435 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 C1orf127Q8N9H9 656 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 RABGGTAQ92696 567 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 VPS16Q9H269 839 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 TMEM8AQ9HCN3 771 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 CACNG4Q9UBN1 327 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 DNAJB4Q9UDY4 337 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 LIMA1Q9UHB6 759 aaKnown RBP16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 MSRAQ9UJ68 235 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 ITGA11Q9UKX5 1188 aa16.97■□□□□ 0.31
TUBA3E-201ENST00000312988 LCHNA4D1U4 455 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 MYOGP15173 224 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 POLR2BP30876 1174 aaKnown RBP16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 FMO5P49326 533 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 COPB1P53618 953 aaKnown RBP16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 MYL7Q01449 175 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 DSC1Q08554 894 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 VWA3BQ502W6 1294 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 TDRD10Q5VZ19 366 aaKnown RBP16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 KRT39Q6A163 491 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 COLGALT2Q8IYK4 626 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 UROC1Q96N76 676 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 AGAP1Q9UPQ3 857 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 PRG3Q9Y2Y8 225 aaPredicted RBP16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 PCDHA11Q9Y5I1 949 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 COL4A6Q14031 1691 aa16.96■□□□□ 0.31
TUBA3E-201ENST00000312988 PODXLO00592 558 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 B4GALT3O60512 393 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 C4BPAP04003 597 aaKnown RBP16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 LAG3P18627 525 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 RPL9P32969 192 aaKnown RBP16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 CLCNKBP51801 687 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 RBP5P82980 135 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 PLCB2Q00722 1185 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 CETN1Q12798 172 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 RAB30Q15771 203 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 FILIP1LQ4L180 1135 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 CBWD6Q4V339 395 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 CBWD3Q5JTY5 395 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 CBWD5Q5RIA9 395 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 TMEM175Q9BSA9 504 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 PRO3102Q9H379 93 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 NDST4Q9H3R1 872 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 CWH43Q9H720 699 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 AAASQ9NRG9 546 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 FAN1Q9Y2M0 1017 aa16.96■□□□□ 0.3
TUBA3E-201ENST00000312988 ALDH2P05091 517 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 CA3P07451 260 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 LRPAP1P30533 357 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 PBX2P40425 430 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 PBX3P40426 434 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 SLC11A1P49279 550 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 BCAR1P56945 870 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 MCCD1P59942 119 aaPredicted RBP16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 ZACNQ401N2 412 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 FKBP15Q5T1M5 1219 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 C9orf57Q5W0N0 161 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 SP7Q8TDD2 431 aaPredicted RBP16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 ZNF558Q96NG5 402 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 PAAF1Q9BRP4 392 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 COLEC11Q9BWP8 271 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 PBX4Q9BYU1 374 aa16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 COLQQ9Y215 455 aaPredicted RBP16.95■□□□□ 0.3
TUBA3E-201ENST00000312988 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 PPEF2O14830 753 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 B3GAT3O94766 335 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 GALTP07902 379 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 FANCCQ00597 558 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 NCOA4Q13772 614 aa16.94■□□□□ 0.3
TUBA3E-201ENST00000312988 MIIPQ5JXC2 388 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms