RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 MT-ND3P03897 115 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 AMHP03971 560 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 GSNP06396 782 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 THP07101 528 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 GFAPP14136 432 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HMGCS2P54868 508 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ELF2Q15723 593 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NBPF9Q3BBW0 867 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 IQSEC1Q6DN90 963 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TMEM270Q6UE05 265 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PLEKHH3Q7Z736 793 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SETD3Q86TU7 594 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ATP11CQ8NB49 1132 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PDZD8Q8NEN9 1154 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SLC7A14Q8TBB6 771 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CFAP36Q96G28 342 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 POLR3CQ9BUI4 534 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 STK33Q9BYT3 514 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TMEM8AQ9HCN3 771 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 LNPEPQ9UIQ6 1025 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MTMR6Q9Y217 621 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PKP3Q9Y446 797 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CLUHO75153 1309 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MYH7BA7E2Y1 1941 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 A0A1W2PQ67 120 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RTN2O75298 545 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 H2AFYO75367 372 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ECM2O94769 699 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NDUFA10O95299 355 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 STIP1P31948 543 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CAP2P40123 477 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 FXR2P51116 673 aaKnown RBP eCLIP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 KIF23Q02241 960 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF543Q08ER8 600 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ITGA9Q13797 1035 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HIST2H2ACQ16777 129 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HIST2H2AA3Q6FI13 130 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NAPEPLDQ6IQ20 393 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TMEM199Q8N511 208 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NSUN7Q8NE18 718 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SH3RF3Q8TEJ3 882 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RSAD1Q9HA92 442 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CYP3A43Q9HB55 503 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RGL1Q9NZL6 768 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PCDHB6Q9Y5E3 794 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 COL14A1Q05707 1796 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 KIF13AQ9H1H9 1805 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SSU72P8A0A1W2PR75 194 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SMIM23A6NLE4 172 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CLGNO14967 610 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CREB3O43889 395 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PLS3P13797 630 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ADORA1P30542 326 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TPI1P60174 286 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HLFQ16534 295 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TTC19Q6DKK2 380 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TATDN1Q6P1N9 297 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 GMCL1P1Q8NEA9 526 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MXRA8Q9BRK3 442 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 TRAIPQ9BWF2 469 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MOV10L1Q9BXT6 1211 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PRRG3Q9BZD7 231 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RAD18Q9NS91 495 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 FANCLQ9NW38 375 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NCKAP1Q9Y2A7 1128 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 AAR2Q9Y312 384 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RPTORQ8N122 1335 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 A0A087WZ62 844 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SYNCRIPO60506 623 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 DR1Q01658 176 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 R3HDM1Q15032 1099 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PDK1Q15118 436 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 WDR72Q3MJ13 1102 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 BOLA3Q53S33 107 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 LRRC8EQ6NSJ5 796 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 LZTR1Q8N653 840 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RNF149Q8NC42 400 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 C7orf57Q8NEG2 295 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 HPS3Q969F9 1004 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SENP7Q9BQF6 1050 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 ENOPH1Q9UHY7 261 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 SLC30A1Q9Y6M5 507 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 M0QYT0 321 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 AP1G2O75843 785 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CELF2O95319 508 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CYP2C9P11712 490 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CYP2C18P33260 490 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 RENBPP51606 427 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 BYSLQ13895 437 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 EEPD1Q7L9B9 569 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 MSL3Q8N5Y2 521 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 BLZF1Q9H2G9 400 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 CPSF2Q9P2I0 782 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 PACSIN2Q9UNF0 486 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 APOBEC2Q9Y235 224 aaKnown RBP3.36□□□□□ -1.87
CLOCK-201ENST00000309964 INPP5FQ9Y2H2 1132 aa3.36□□□□□ -1.87
CLOCK-201ENST00000309964 NRCAMQ92823 1304 aa3.35□□□□□ -1.87
CLOCK-201ENST00000309964 GTPBP10A4D1E9 387 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms