RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TTC3P53804 2025 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 LAMA1P25391 3075 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 DNAJC25-GNG10A0A024R161 153 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 TBKBP1A7MCY6 615 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 N4BP1O75113 896 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 RECQL4O94761 1208 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 IPO7O95373 1038 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 NFICP08651 508 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 TNFRSF8P28908 595 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 POLR2BP30876 1174 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 NOVP48745 357 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 MYL6P60660 151 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 PAK2Q13177 524 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ARHGAP29Q52LW3 1261 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 XXYLT1Q8NBI6 393 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 NEK11Q8NG66 645 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 FAM149B1Q96BN6 582 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 RHOBTB2Q9BYZ6 727 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 GCOM2Q9BZD3 368 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 RPF1Q9H9Y2 349 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 ALG13Q9NP73 1137 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 VTA1Q9NP79 307 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 DACH1Q9UI36 760 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ADAM21Q9UKJ8 722 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 DUSP10Q9Y6W6 482 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 RPTORQ8N122 1335 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 LAD1O00515 517 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 CYP26A1O43174 497 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 HMBSP08397 361 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 STAG3L1P0CL83 205 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 CCNE1P24864 410 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ERCC5P28715 1186 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 CTCFP49711 727 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 PPP3CAQ08209 521 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 PPP2R5CQ13362 524 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 LRRC31Q6UY01 552 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.31□□□□□ -1.56
CAST-201ENST00000309190 CACUL1Q86Y37 369 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ARRDC4Q8NCT1 418 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 BADQ92934 168 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ACCSQ96QU6 501 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 YME1L1Q96TA2 773 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 LBHD1Q9BQE6 289 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 MTG1Q9BT17 334 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 TSPYL2Q9H2G4 693 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 NDST4Q9H3R1 872 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 KLHL11Q9NVR0 708 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 MORF4L1Q9UBU8 362 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 STK17AQ9UEE5 414 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 PTPN22Q9Y2R2 807 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 TTLL3Q9Y4R7 772 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 TTC26A0AVF1 554 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ZNF233A6NK53 670 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 MFAP3LO75121 409 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ATP2C2O75185 946 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 DUSP11O75319 330 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 HNRNPH3P31942 346 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 FNTAP49354 379 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 MXI1P50539 228 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ITIH3Q06033 890 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 TAF12Q16514 161 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 EXOC3L4Q17RC7 722 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ASTE1Q2TB18 679 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 MORN1Q5T089 497 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 SPATA1Q5VX52 437 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 ADSSL1Q8N142 457 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 MCPH1Q8NEM0 835 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 GDAP1L1Q96MZ0 367 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 MED10Q9BTT4 135 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 IMPG2Q9BZV3 1241 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 CXXC1Q9P0U4 656 aaPredicted RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 TUBGCP4Q9UGJ1 667 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 SLC27A5Q9Y2P5 690 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 LUC7L2Q9Y383 392 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 PCDHB4Q9Y5E5 795 aa5.31□□□□□ -1.56
CAST-201ENST00000309190 PRRC2CQ9Y520 2896 aaKnown RBP5.31□□□□□ -1.56
CAST-201ENST00000309190 TGFB1I1O43294 461 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 TGFB3P10600 412 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ITGB8P26012 769 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ADSSP30520 456 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 TCP11X2Q5H9J9 407 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 SCYL2Q6P3W7 929 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 DSTYKQ6XUX3 929 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 STXBP4Q6ZWJ1 553 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 TMEM161BQ8NDZ6 487 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ADAM32Q8TC27 787 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 AENQ8WTP8 325 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 CPA5Q8WXQ8 436 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 BTBD6Q96KE9 485 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 HEXIM2Q96MH2 286 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 DUSP9Q99956 384 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 MYH10P35580 1976 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 CLDN5O00501 218 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 TBX3O15119 743 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ZEB2O60315 1214 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 CYP3A7P24462 503 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 RPL13P26373 211 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 WEE1P30291 646 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 HOXD13P35453 343 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms