RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PLEKHA5Q9HAU0 1116 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 ZDHHC7Q9NXF8 308 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 TFIP11Q9UBB9 837 aaKnown RBP21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 BACE2Q9Y5Z0 518 aa21.63■■□□□ 1.05
PDZRN3-202ENST00000308537 CACNA1HO95180 2353 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 PPP6R2O75170 966 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 KRT18P05783 430 aaKnown RBP21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 ASGR2P07307 311 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 RPL9P32969 192 aaKnown RBP21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 LIG4P49917 911 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 SPAG1Q07617 926 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 SIGLEC14Q08ET2 396 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 KCNA1Q09470 495 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 MRPL58Q14197 206 aaKnown RBP21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 AXDND1Q5T1B0 1012 aaPredicted RBP21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 HSCBQ8IWL3 235 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 TDRD5Q8NAT2 981 aaKnown RBP21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 FGFBP2Q9BYJ0 223 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 PRKD2Q9BZL6 878 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 CPSF3Q9UKF6 684 aaKnown RBP21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 SCN1AP35498 2009 aa21.62■■□□□ 1.05
PDZRN3-202ENST00000308537 CLUHO75153 1309 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 TMEM221A6NGB7 291 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 LACTBL1A8MY62 500 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 M0R296 226 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 SPTLC2O15270 562 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 OGTO15294 1046 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 ZSCAN22P10073 491 aaPredicted RBP21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 ADSSP30520 456 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 LRPAP1P30533 357 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 BICD1Q96G01 975 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 PANK2Q9BZ23 570 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 ZHX3Q9H4I2 956 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 LIMD1Q9UGP4 676 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 DPP7Q9UHL4 492 aa21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 ARIH1Q9Y4X5 557 aaPredicted RBP21.61■■□□□ 1.05
PDZRN3-202ENST00000308537 TSC2P49815 1807 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 YEATS4O95619 227 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 F13A1P00488 732 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 OR1D2P34982 312 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 AARSP49588 968 aaKnown RBP eCLIP21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 CASP5P51878 434 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 STK38Q15208 465 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 VARS2Q5ST30 1063 aaKnown RBP21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SLC8B1Q6J4K2 584 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 PDXDC1Q6P996 788 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SHC4Q6S5L8 630 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 CCDC73Q6ZRK6 1079 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SV2BQ7L1I2 683 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SMG7Q92540 1137 aaKnown RBP21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SUSD3Q96L08 255 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 MYADMQ96S97 322 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 OLFML3Q9NRN5 406 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SORCS3Q9UPU3 1222 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 CDY1Q9Y6F8 540 aa21.6■■□□□ 1.05
PDZRN3-202ENST00000308537 SYN3O14994 580 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 CYP3A5P20815 502 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 TXLNAP40222 546 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 GUCY2FP51841 1108 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 FOXD4L5Q5VV16 416 aaPredicted RBP21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 CRELD2Q6UXH1 353 aaPredicted RBP21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 PLCD3Q8N3E9 789 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 FOXD4L4Q8WXT5 416 aaPredicted RBP21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 SEL1LQ9UBV2 794 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 PIEZO1Q92508 2521 aa21.59■■□□□ 1.05
PDZRN3-202ENST00000308537 SPDYE4A6NLX3 237 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 PPEF2O14830 753 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 TRAPPC3O43617 180 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 ABLIM3O94929 683 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 C8AP07357 584 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 HOXA9P31269 272 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 STAT6P42226 847 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 ROR1Q01973 937 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 ANKS3Q6ZW76 656 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 OTOP3Q7RTS5 596 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 PDILTQ8N807 584 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 HVCN1Q96D96 273 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 MSTO1Q9BUK6 570 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 KBTBD4Q9NVX7 518 aa21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 UBQLN1Q9UMX0 589 aaKnown RBP21.58■■□□□ 1.05
PDZRN3-202ENST00000308537 WDR27A2RRH5 827 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 M0QZQ0 153 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 PDGFBP01127 241 aaPredicted RBP21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 POU2F2P09086 479 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 GAP43P17677 238 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 ABCD1P33897 745 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 MATR3P43243 847 aaKnown RBP eCLIP21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 PPP2R3AQ06190 1150 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 KYAT1Q16773 422 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 ELMSAN1Q6PJG2 1045 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 ZSWIM2Q8NEG5 633 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 KIF12Q96FN5 646 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 ZNF396Q96N95 335 aaPredicted RBP21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 EPS15L1Q9UBC2 864 aa21.57■■□□□ 1.04
PDZRN3-202ENST00000308537 NFICP08651 508 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 HNRNPA1P09651 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 PDIA4P13667 645 aaKnown RBP21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 ACOT2P49753 483 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 WNT7BP56706 349 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 MTMR3Q13615 1198 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms