RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 DNAJC7Q99615 494 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 DPH5Q9H2P9 285 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 PTPN22Q9Y2R2 807 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 GDAQ9Y2T3 454 aa8.8□□□□□ -1
PCDHB1-201ENST00000306549 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 TOM1L1O75674 476 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 GSNP06396 782 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 ERVK-9P63128 1117 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 ERVK-24P63145 666 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 NSUN2Q08J23 767 aaKnown RBP eCLIP8.79□□□□□ -1
PCDHB1-201ENST00000306549 KCNH2Q12809 1159 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 PHKG1Q16816 387 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 DCUN1D1Q96GG9 259 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 YME1L1Q96TA2 773 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 FAM129AQ9BZQ8 928 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 FANCLQ9NW38 375 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 RWDD3Q9Y3V2 267 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 ARHGAP10A1A4S6 786 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 DNAJC6O75061 913 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 RASSF7Q02833 373 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 COASYQ13057 564 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TRMT10CQ7L0Y3 403 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 CLIC6Q96NY7 704 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 MAN1B1Q9UKM7 699 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 CICQ96RK0 1608 aaPredicted RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 PODXLO00592 558 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 HLA-DPA1P20036 260 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 PRKCEQ02156 737 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TCP11X2Q5H9J9 407 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TAB3Q8N5C8 712 aaPredicted RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 PHF20Q9BVI0 1012 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 CNTRLQ7Z7A1 2325 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 SYCE1LA8MT33 242 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 UBE2Q2LH0YL09 131 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 ZW10O43264 779 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 NPTXRO95502 500 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TAGAPQ8N103 731 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 PDIK1LQ8N165 341 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 SRBD1Q8N5C6 995 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 MKL1Q969V6 931 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 YIPF2Q9BWQ6 316 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 PI4K2BG5E9Z4 385 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 PRPF4O43172 522 aaKnown RBP eCLIP8.79□□□□□ -1
PCDHB1-201ENST00000306549 PRR29P0C7W0 189 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 ETFBP38117 255 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 RPL10AP62906 217 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 EMC2Q15006 297 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TEDDM1Q5T9Z0 273 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 RIOX2Q8IUF8 465 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 CDCA5Q96FF9 252 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TACO1Q9BSH4 297 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 IPPQ9Y573 584 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 DDX60Q8IY21 1712 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 ZNF638Q14966 1978 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 FAM196BA6NMK8 535 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 DDNO94850 711 aaPredicted RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 ARIH2O95376 493 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 SDC4P31431 198 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 LBRQ14739 615 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 ANO4Q32M45 955 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 TRAPPC11Q7Z392 1133 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 ZMAT2Q96NC0 199 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 INTS9Q9NV88 658 aaKnown RBP8.79□□□□□ -1
PCDHB1-201ENST00000306549 GAKO14976 1311 aa8.79□□□□□ -1
PCDHB1-201ENST00000306549 SNAP23O00161 211 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 BUB1O43683 1085 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 AMHP03971 560 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 EFHC2Q5JST6 749 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 ARMC6Q6NXE6 501 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 EFCAB12Q6NXP0 572 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 TEX9Q8N6V9 391 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 SENP7Q9BQF6 1050 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 ZCCHC17Q9NP64 241 aaKnown RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 KCNA1Q09470 495 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 MYBPC2Q14324 1141 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 THNSL1Q8IYQ7 743 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 SP110Q9HB58 689 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 KCNH7Q9NS40 1196 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 KLHL8Q9P2G9 620 aaPredicted RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 MAGED2Q9UNF1 606 aaPredicted RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 LRRIQ3A6PVS8 624 aaPredicted RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 CYP2C8P10632 490 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 PSMA2P25787 234 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 VCPP55072 806 aaKnown RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 ADAM22Q9P0K1 906 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 IP6K2Q9UHH9 426 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 TUBE1Q9UJT0 475 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 TRIM33Q9UPN9 1127 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 EFCAB8A8MWE9 144 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 KPNA7A9QM74 516 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 HSPA1AP0DMV8 641 aaKnown RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 HSPA1BP0DMV9 641 aaKnown RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 TCF3P15923 654 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 LCA5Q86VQ0 697 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 ATG4CQ96DT6 458 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 STN1Q9H668 368 aaKnown RBP8.78□□□□□ -1
PCDHB1-201ENST00000306549 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 PARVAQ9NVD7 372 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 CCDC78A2IDD5 438 aa8.78□□□□□ -1
PCDHB1-201ENST00000306549 EXTL3O43909 919 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms