RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 DDX5P17844 614 aaKnown RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 LRRC8BQ6P9F7 803 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 RBM46Q8TBY0 533 aaKnown RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 CCT8L2Q96SF2 557 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 JPH1Q9HDC5 661 aaPredicted RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 LRIG3Q6UXM1 1119 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 SPATA2LQ8IUW3 424 aaPredicted RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 CLEC4FQ8N1N0 589 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 NEDD1Q8NHV4 660 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 NEU2Q9Y3R4 380 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 DEAF1O75398 565 aaPredicted RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 LRRC74AQ0VAA2 488 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 UVRAGQ9P2Y5 699 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 PIN4Q9Y237 131 aaKnown RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 TTC37Q6PGP7 1564 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 MYO1GB0I1T2 1018 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 FOXP2O15409 715 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 CDH16O75309 829 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 SOX11P35716 441 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 ACOT2P49753 483 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 MRPL28Q13084 256 aaKnown RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 RAB42Q8N4Z0 105 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 SLC7A5P2Q9GIP4 190 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 RPAP3Q9H6T3 665 aaPredicted RBP21.5■■□□□ 1.03
MTCL1-201ENST00000306329 ZDHHC9Q9Y397 364 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 ITIH2P19823 946 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 SYTL3Q4VX76 610 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 ARMC2Q8NEN0 867 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 CYGBQ8WWM9 190 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 PDLIM2Q96JY6 352 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 MCEEQ96PE7 176 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 TASP1Q9H6P5 420 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 ATP11BQ9Y2G3 1177 aa21.5■■□□□ 1.03
MTCL1-201ENST00000306329 HIST1H2AGP0C0S8 130 aaPredicted RBP21.49■■□□□ 1.03
MTCL1-201ENST00000306329 HIST1H2ADP20671 130 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 FMR1Q06787 632 aaKnown RBP eCLIP21.49■■□□□ 1.032e-6■■■■■ 28.3
MTCL1-201ENST00000306329 ZNF467Q7Z7K2 595 aaPredicted RBP21.49■■□□□ 1.03
MTCL1-201ENST00000306329 IFNEQ86WN2 208 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 OR2W6PQ8NHA6 318 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 INPP5DQ92835 1189 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 HIST1H2AHQ96KK5 128 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 HIST1H2AJQ99878 128 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 SH2D3AQ9BRG2 576 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 H2AFJQ9BTM1 129 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 A0A1B0GTH6 734 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 ASMTLO95671 621 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 PKN3Q6P5Z2 889 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 PLD3Q8IV08 490 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 PTPRN2Q92932 1015 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 EME1Q96AY2 570 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 ARHGEF26Q96DR7 871 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 E2F8A0AVK6 867 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 CYFIP2Q96F07 1278 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 ZC3H4Q9UPT8 1303 aaKnown RBP21.49■■□□□ 1.03
MTCL1-201ENST00000306329 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 SRP72O76094 671 aaKnown RBP21.49■■□□□ 1.03
MTCL1-201ENST00000306329 ARIH2O95376 493 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 STAT5BP51692 787 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 ZNF200P98182 395 aaPredicted RBP21.49■■□□□ 1.03
MTCL1-201ENST00000306329 PDIA5Q14554 519 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 FBXW10Q5XX13 1052 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 AGGF1Q8N302 714 aaeCLIP21.49■■□□□ 1.03
MTCL1-201ENST00000306329 SNX9Q9Y5X1 595 aa21.49■■□□□ 1.03
MTCL1-201ENST00000306329 SRGNP10124 158 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 MKRN4PQ13434 485 aaPredicted RBP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 ALDH8A1Q9H2A2 487 aaPredicted RBP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 TRIM10Q9UDY6 481 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 DEPDC1Q5TB30 811 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 FAM32AQ9Y421 112 aaKnown RBP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 AP3B1O00203 1094 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 TRIM60Q495X7 471 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 AARS2Q5JTZ9 985 aaKnown RBP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 ATPAF2Q8N5M1 289 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 TSPAN17Q96FV3 270 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 ZCWPW1Q9H0M4 648 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 KDM5CP41229 1560 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 NCAPD2Q15021 1401 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 EIF3HO15372 352 aaKnown RBP eCLIP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 CDH2P19022 906 aaPredicted RBP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 APOBEC3FQ8IUX4 373 aaKnown RBP21.48■■□□□ 1.03
MTCL1-201ENST00000306329 CHMP2BQ9UQN3 213 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 TMEM143Q96AN5 459 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 SMARCAL1Q9NZC9 954 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 CLCA2Q9UQC9 943 aa21.48■■□□□ 1.03
MTCL1-201ENST00000306329 C16orf96A6NNT2 1141 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 ADCY3O60266 1144 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 HSPA1AP0DMV8 641 aaKnown RBP21.47■■□□□ 1.03
MTCL1-201ENST00000306329 HSPA1BP0DMV9 641 aaKnown RBP21.47■■□□□ 1.03
MTCL1-201ENST00000306329 COPB2P35606 906 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 FMO5P49326 533 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 APPL2Q8NEU8 664 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 ERP27Q96DN0 273 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 FAM118BQ9BPY3 351 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 DDX50Q9BQ39 737 aaKnown RBP21.47■■□□□ 1.03
MTCL1-201ENST00000306329 THTPAQ9BU02 230 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 C20orf96Q9NUD7 363 aaPredicted RBP21.47■■□□□ 1.03
MTCL1-201ENST00000306329 AGPAT5Q9NUQ2 364 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 FAM47DPA6NHR8 397 aa21.47■■□□□ 1.03
MTCL1-201ENST00000306329 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
MTCL1-201ENST00000306329 AIM2O14862 343 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms