RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MIF4GDA9UHW6 222 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF862O60290 1169 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 ALCAMQ13740 583 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 IZUMO3Q5VZ72 239 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 YAF2Q8IY57 180 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 MRPL48Q96GC5 212 aaKnown RBP14.04□□□□□ -0.16
TRIM56-201ENST00000306085 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
TRIM56-201ENST00000306085 PPP6R2O75170 966 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 PEX3P56589 373 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 RBBP4Q09028 425 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 STAP1Q9ULZ2 295 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 TCHHQ07283 1943 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CENPXA8MT69 81 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 F8W810 466 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 MFAP3LO75121 409 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CDHR1Q96JP9 859 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 OSBPL6Q9BZF3 934 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 APRTP07741 180 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 SARSP49591 514 aaKnown RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 SESN2P58004 480 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 PTPRN2Q92932 1015 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 HDAC6Q9UBN7 1215 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 NCK2O43639 380 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 NDUFS3O75489 264 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 AKAP5P24588 427 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CDH6P55285 790 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 KCNK10P57789 538 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 LGALS3BPQ08380 585 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CYP51A1Q16850 503 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 EFHBQ8N7U6 833 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 NOL6Q9H6R4 1146 aaKnown RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 NUP107P57740 925 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 STX4Q12846 297 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 FAM102AQ5T9C2 384 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF624Q9P2J8 865 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 MYO9BQ13459 2157 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 SHCBP1Q8NEM2 672 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 GPR101Q96P66 508 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 IP6K2Q9UHH9 426 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 PSTPIP1O43586 416 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 KCNQ4P56696 695 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF614Q8N883 585 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 INTS13Q9NVM9 706 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CCND1P24385 295 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 AKR1D1P51857 326 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 PIGOQ8TEQ8 1089 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 AGAP3Q96P47 875 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 EPS8L2Q9H6S3 715 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 STK39Q9UEW8 545 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 PCDHGA4Q9Y5G9 962 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 MYH6P13533 1939 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 GDF11O95390 407 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 FGAP02671 866 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 SCARA3Q6AZY7 606 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF746Q6NUN9 644 aaPredicted RBP14.03□□□□□ -0.16
TRIM56-201ENST00000306085 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 TASP1Q9H6P5 420 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 DNAJC12Q9UKB3 198 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 PCDHB8Q9UN66 801 aa14.03□□□□□ -0.16
TRIM56-201ENST00000306085 CDC16Q13042 620 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 CCDC157Q569K6 752 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 CC2D1AQ6P1N0 951 aaPredicted RBP14.02□□□□□ -0.16
TRIM56-201ENST00000306085 MACC1Q6ZN28 852 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 PRUNE1Q86TP1 453 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 ASAP3Q8TDY4 903 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 KLHL11Q9NVR0 708 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 RGS12O14924 1447 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 CLRN2A0PK11 232 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 PIK3R1P27986 724 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 OTOAQ7RTW8 1153 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 MCM8Q9UJA3 840 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 MAP3K13O43283 966 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 ZNF23P17027 643 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 HSPA13P48723 471 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 CCSAPQ6IQ19 270 aaPredicted RBP14.02□□□□□ -0.16
TRIM56-201ENST00000306085 EPHX4Q8IUS5 362 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 BTG4Q9NY30 223 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 ATP5JP18859 108 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 POU1F1P28069 291 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 NFX1Q12986 1120 aaKnown RBP14.02□□□□□ -0.16
TRIM56-201ENST00000306085 ANKS6Q68DC2 871 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.16
TRIM56-201ENST00000306085 DDX56Q9NY93 547 aaKnown RBP14.02□□□□□ -0.16
TRIM56-201ENST00000306085 COQ6Q9Y2Z9 468 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.16
TRIM56-201ENST00000306085 SSH2Q76I76 1423 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 SCGNO76038 276 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-201ENST00000306085 A0A1W2PRG6 482 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 PCP4L1A6NKN8 68 aa14.02□□□□□ -0.17
TRIM56-201ENST00000306085 FCHO2Q0JRZ9 810 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms