RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ANHXE9PGG2 379 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 HNRNPDLO14979 420 aaKnown RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 ADAM12O43184 909 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 XPOTO43592 962 aaKnown RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 PIGRP01833 764 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 PLCG1P19174 1290 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 BRCC3P46736 316 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 SLC10A6Q3KNW5 377 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 VARS2Q5ST30 1063 aaKnown RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 MTSS1LQ765P7 747 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 GRASPQ7Z6J2 395 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 SLC44A3Q8N4M1 653 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 APPL2Q8NEU8 664 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 ZNF461Q8TAF7 563 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 RTP3Q9BQQ7 232 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 BLOC1S4Q9NUP1 217 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 CDH7Q9ULB5 785 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 KCNH3Q9ULD8 1083 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 MAFFQ9ULX9 164 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 TBX20Q9UMR3 447 aa18.18■□□□□ 0.5
TRAPPC1-201ENST00000303731 DOCK6Q96HP0 2047 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 NPHP3-ACAD11A0A0J9YXS1 232 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 K7ENM7 598 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 CCL16O15467 120 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 TRAK2O60296 914 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 AOC1P19801 751 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 CYP3A5P20815 502 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 ELF1P32519 619 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 PPP2R3AQ06190 1150 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 KARSQ15046 597 aaKnown RBP18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 TMEM105Q8N8V8 129 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 SUSD3Q96L08 255 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 OXCT2Q9BYC2 517 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 CCDC39Q9UFE4 941 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 POLIQ9UNA4 740 aa18.17■□□□□ 0.5
TRAPPC1-201ENST00000303731 TTC26A0AVF1 554 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 I3L4J1 428 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 ABLIM3O94929 683 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 CXCL8P10145 99 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 PAX3P23760 479 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 MCM4P33991 863 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 DDIT3P35638 169 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 TXLNAP40222 546 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 ROR1Q01973 937 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 HTR4Q13639 388 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 MRPL58Q14197 206 aaKnown RBP18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 DHX8Q14562 1220 aaKnown RBP18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 PABPC1LQ4VXU2 614 aaKnown RBP18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 TPGS2Q68CL5 300 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 ZNF280DQ6N043 979 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 CD302Q8IX05 232 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 SIX5Q8N196 739 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 FLCNQ8NFG4 579 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 C18orf25Q96B23 403 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 STK17AQ9UEE5 414 aa18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 UBQLN1Q9UMX0 589 aaKnown RBP18.16■□□□□ 0.5
TRAPPC1-201ENST00000303731 ARHGEF37A1IGU5 675 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 OGTO15294 1046 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 TBC1D4O60343 1298 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 LRG1P02750 347 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 ATF2P15336 505 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 IGFBP6P24592 240 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 LRPAP1P30533 357 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 GTF2BQ00403 316 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 MCM6Q14566 821 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 CWF19L1Q69YN2 538 aaKnown RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 RSPO2Q6UXX9 243 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 KRI1Q8N9T8 703 aaKnown RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 RSAD2Q8WXG1 361 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 ATOH1Q92858 354 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 ST6GALNAC4Q9H4F1 302 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 AVENQ9NQS1 362 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 SLC2A4RGQ9NR83 387 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 PCDHB8Q9UN66 801 aa18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 MORC2Q9Y6X9 1032 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC1-201ENST00000303731 WDR27A2RRH5 827 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 PRRG1O14668 218 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 MEFVO15553 781 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 NARSO43776 548 aaKnown RBP18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 CFHP08603 1231 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 RFX1P22670 979 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 MARCKSP29966 332 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 GRIN1Q05586 938 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 CTXN3Q4LDR2 81 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 SEZ6Q53EL9 994 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 MAP4K3Q8IVH8 894 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 TCEAL8Q8IYN2 117 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 DDX12PQ92771 950 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 FGF13Q92913 245 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 HVCN1Q96D96 273 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 KIF12Q96FN5 646 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 MSTO1Q9BUK6 570 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 ZHX3Q9H4I2 956 aa18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 RPF1Q9H9Y2 349 aaKnown RBP18.14■□□□□ 0.49
TRAPPC1-201ENST00000303731 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms