RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 AFPP02771 609 aaKnown RBP10.26□□□□□ -0.77
RFX3-201ENST00000302303 THP07101 528 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 KRT13P13646 458 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 TNNI1P19237 187 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 CYP3A5P20815 502 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 LRPAP1P30533 357 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 GTF2H1P32780 548 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 MTIF2P46199 727 aaKnown RBP10.26□□□□□ -0.77
RFX3-201ENST00000302303 TFAMQ00059 246 aaKnown RBP10.26□□□□□ -0.77
RFX3-201ENST00000302303 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 SURF1Q15526 300 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 UVSSAQ2YD98 709 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 EPC2Q52LR7 807 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 DCAF17Q5H9S7 520 aaPredicted RBP10.26□□□□□ -0.77
RFX3-201ENST00000302303 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 GLB1LQ6UWU2 654 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 NT5DC4Q86YG4 428 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 CREBRFQ8IUR6 639 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 HERC6Q8IVU3 1022 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 HACE1Q8IYU2 909 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 C3orf58Q8NDZ4 430 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 PHOSPHO2Q8TCD6 241 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
RFX3-201ENST00000302303 FNBP1Q96RU3 617 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 TSPAN18Q96SJ8 248 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 TMEM8AQ9HCN3 771 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 INPP5FQ9Y2H2 1132 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 SIK3Q9Y2K2 1263 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 LCHNA4D1U4 455 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 TBKBP1A7MCY6 615 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 ZBBXA8MT70 800 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 SPTLC1O15269 473 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 EFEMP2O95967 443 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 PRKCSHP14314 528 aaPredicted RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 SLC9A1P19634 815 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 CDK11BP21127 795 aaKnown RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 KLK7P49862 253 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 APBA1Q02410 837 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 GRIK3Q13003 919 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 UPP1Q16831 310 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 TCERG1LQ5VWI1 586 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 C9orf57Q5W0N0 161 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 RABGGTAQ92696 567 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 XPO4Q9C0E2 1151 aaKnown RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 APOBEC3GQ9HC16 384 aaKnown RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 SIX2Q9NPC8 291 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 DPP3Q9NY33 737 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 IFNKQ9P0W0 207 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 LRFN2Q9ULH4 789 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 UBQLN1Q9UMX0 589 aaKnown RBP10.25□□□□□ -0.77
RFX3-201ENST00000302303 SLC4A7Q9Y6M7 1214 aa10.25□□□□□ -0.77
RFX3-201ENST00000302303 NOL4O94818 638 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 HLA-DRAP01903 254 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 ITGB3P05106 788 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 ITGB1P05556 798 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 MYOGP15173 224 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 ATP2A2P16615 1042 aaKnown RBP10.24□□□□□ -0.77
RFX3-201ENST00000302303 PON1P27169 355 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 KCNJ6P48051 423 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 CLCNKBP51801 687 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 RABGGTBP53611 331 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 AP3M2P53677 418 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 MYL6P60660 151 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 TUSC3Q13454 348 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 GSE1Q14687 1217 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 PAN2Q504Q3 1202 aaKnown RBP10.24□□□□□ -0.77
RFX3-201ENST00000302303 KRT39Q6A163 491 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 SPRED2Q7Z698 418 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 TMEM173Q86WV6 379 aaPredicted RBP10.24□□□□□ -0.77
RFX3-201ENST00000302303 BCL7CQ8WUZ0 217 aaPredicted RBP10.24□□□□□ -0.77
RFX3-201ENST00000302303 ERGIC2Q96RQ1 377 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 SLC9A7Q96T83 725 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 CRACR2AQ9BSW2 395 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 UBE2OQ9C0C9 1292 aaKnown RBP10.24□□□□□ -0.77
RFX3-201ENST00000302303 MMRN2Q9H8L6 949 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 GRPEL1Q9HAV7 217 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 KANSL3Q9P2N6 904 aa10.24□□□□□ -0.77
RFX3-201ENST00000302303 GTPBP10A4D1E9 387 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 CASTOR2A6NHX0 329 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 EPHB6O15197 1021 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 P4HA2O15460 535 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 HOXA2O43364 376 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 ASS1P00966 412 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 GALTP07902 379 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 POLR2BP30876 1174 aaKnown RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 PBX3P40426 434 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 SLC11A1P49279 550 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 AARSP49588 968 aaKnown RBP eCLIP10.23□□□□□ -0.77
RFX3-201ENST00000302303 MXI1P50539 228 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 UBASH3AP57075 661 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 MLLT1Q03111 559 aaPredicted RBP10.23□□□□□ -0.77
RFX3-201ENST00000302303 SPOPLQ6IQ16 392 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 PHLDB3Q6NSJ2 640 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 LIMS2Q7Z4I7 341 aa10.23□□□□□ -0.77
RFX3-201ENST00000302303 CMTR2Q8IYT2 770 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms