RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ADAM17P78536 824 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 ITIH3Q06033 890 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 CUL2Q13617 745 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 NCOA4Q13772 614 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 ELF2Q15723 593 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 MEI1Q5TIA1 1274 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 MFSD14CQ5VZR4 134 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
TPM3-202ENST00000302206 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
TPM3-202ENST00000302206 OR5B17Q8NGF7 314 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 TPCN2Q8NHX9 752 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 SLC20A1Q8WUM9 679 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
TPM3-202ENST00000302206 RFFLQ8WZ73 363 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 TAF4BQ92750 862 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 ZBTB10Q96DT7 871 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 ADAMTS10Q9H324 1103 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
TPM3-202ENST00000302206 SETD4Q9NVD3 440 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
TPM3-202ENST00000302206 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 TSPAN1O60635 241 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 TNNC2P02585 160 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 TUBBP07437 444 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 ACO1P21399 889 aaKnown RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 HOXC8P31273 242 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 USP8P40818 1118 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 SGSM1Q2NKQ1 1148 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 LMBRD2Q68DH5 695 aaPredicted RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 NT5DC4Q86YG4 428 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 CD302Q8IX05 232 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 RHOT2Q8IXI1 618 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 UBR7Q8N806 425 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 LRRC57Q8N9N7 239 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 DDX1Q92499 740 aaKnown RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 ANKRD36BP1Q96IX9 119 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 OSBPL9Q96SU4 736 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 PI4K2AQ9BTU6 479 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
TPM3-202ENST00000302206 ASB7Q9H672 318 aa12.88□□□□□ -0.35
TPM3-202ENST00000302206 A0A1B0GUA9 196 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 GPR32O75388 356 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 MTA2O94776 668 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 ERLIN2O94905 339 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 TMEM191BP0C7N4 346 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 STAG3L1P0CL83 205 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 GNAT1P11488 350 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 CYBAP13498 195 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 H2AFXP16104 143 aaPredicted RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 ARF4P18085 180 aaPredicted RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 CTGFP29279 349 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 PSMC4P43686 418 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 NOP2P46087 812 aaKnown RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 GJA9P57773 515 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 FMO1Q01740 532 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 FSCN1Q16658 493 aaKnown RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 TRIM72Q6ZMU5 477 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 SLC47A2Q86VL8 602 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 CREG2Q8IUH2 290 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 THNSL1Q8IYQ7 743 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 NME8Q8N427 588 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 PCDHB18PQ96TA0 734 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 ADPGKQ9BRR6 497 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.87□□□□□ -0.35
TPM3-202ENST00000302206 PUF60Q9UHX1 559 aaKnown RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 V9GYY5 206 aaPredicted RBP12.87□□□□□ -0.35
TPM3-202ENST00000302206 KAT6AQ92794 2004 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 ANK1P16157 1881 aa12.87□□□□□ -0.35
TPM3-202ENST00000302206 FTLP02792 175 aaPredicted RBP12.86□□□□□ -0.35
TPM3-202ENST00000302206 MYL3P08590 195 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 CYP2C9P11712 490 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 KRT5P13647 590 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 AXLP30530 894 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 GRM5P41594 1212 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 ZNF132P52740 706 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 YWHAEP62258 255 aaKnown RBP12.86□□□□□ -0.35
TPM3-202ENST00000302206 GPC5P78333 572 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
TPM3-202ENST00000302206 TRPC3Q13507 836 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 CLEC16AQ2KHT3 1053 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 TEX35Q5T0J7 233 aa12.86□□□□□ -0.35
TPM3-202ENST00000302206 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms