RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PODNQ7Z5L7 613 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 APOL5Q9BWW9 433 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TMEM161AQ9NX61 479 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DONSONQ9NYP3 566 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF229Q9UJW7 825 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MYO3BQ8WXR4 1341 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GALCP54803 685 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 IL17RAQ96F46 866 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 APEX2Q9UBZ4 518 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 EEF2KO00418 725 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ADCY3O60266 1144 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GGPS1O95749 300 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RANBP1P43487 201 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NFIXQ14938 502 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C18orf8Q96DM3 657 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TRIM54Q9BYV2 358 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TMEM132DQ14C87 1099 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TJAP1Q5JTD0 557 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C6orf10Q5SRN2 563 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TSSK1BQ9BXA7 367 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C20orf96Q9NUD7 363 aaPredicted RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 AIM2O14862 343 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MAP4P27816 1152 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PLIN5Q00G26 463 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NCOA4Q13772 614 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 EPHA7Q15375 998 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DDX42Q86XP3 938 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MTBPQ96DY7 904 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 METTL5Q9NRN9 209 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ARHGEF38Q9NXL2 777 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C2CD2LO14523 706 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CPA2P48052 419 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 VEPH1Q14D04 833 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF473Q8WTR7 871 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZMAT2Q96NC0 199 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RBM12Q9NTZ6 932 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CD274Q9NZQ7 290 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MYMKA6NI61 221 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RAP1GDS1P52306 607 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RBBP8NLQ8NC74 664 aaPredicted RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 INPP5DQ92835 1189 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PTPRN2Q92932 1015 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-201ENST00000299847 FLT1P17948 1338 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MAP3K6O95382 1288 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 IL10P22301 178 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SNRNP35Q16560 246 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 GOLGA7BQ2TAP0 167 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ATG9AQ7Z3C6 839 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 IPMKQ8NFU5 416 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KLC4Q9NSK0 619 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZC3H7BQ9UGR2 993 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PCDHGB4Q9UN71 923 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NEO1Q92859 1461 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TNPO2O14787 897 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PHF2O75151 1096 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SLC9A1P19634 815 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HSD17B4P51659 736 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 USP11P51784 963 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 BTKQ06187 659 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DHX34Q14147 1143 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RBM15Q96T37 977 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NEU2Q9Y3R4 380 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 BRD2P25440 801 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CEP55Q53EZ4 464 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RINLQ6ZS11 566 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RCOR2Q8IZ40 523 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ATL2Q8NHH9 583 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 C17orf80Q9BSJ5 609 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 EHD2Q9NZN4 543 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DPYDQ12882 1025 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MGAT5BQ3V5L5 792 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 RARS2Q5T160 578 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CYFIP2Q96F07 1278 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TUFT1Q9NNX1 390 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 SNX12Q9UMY4 172 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CENPAP49450 140 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PWP1Q13610 501 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TEDDM1Q5T9Z0 273 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 TRIM72Q6ZMU5 477 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 MRPL40Q9NQ50 206 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PKP3Q9Y446 797 aa14.25□□□□□ -0.13
CHRFAM7A-201ENST00000299847 NRKQ7Z2Y5 1582 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 CYP2B6P20813 491 aa14.24□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KCNJ1P48048 391 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms