RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 APOL1O14791 398 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 TPST1O60507 370 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 NUP107P57740 925 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 ZNF200P98182 395 aaPredicted RBP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 DNAJC3Q13217 504 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 PDAP1Q13442 181 aaKnown RBP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 VCPKMTQ9H867 229 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 NDUFA13Q9P0J0 144 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 ZC3H7BQ9UGR2 993 aaKnown RBP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 POTECB2RU33 542 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 PAX7P23759 505 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 FAM102AQ5T9C2 384 aaPredicted RBP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 QKIQ96PU8 341 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 PODNQ7Z5L7 613 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 TASP1Q9H6P5 420 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 GPBP1L1Q9HC44 474 aaPredicted RBP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 PARVAQ9NVD7 372 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 MYOM2P54296 1465 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 ARIH2O95376 493 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 TCF3P15923 654 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 ATP1A4Q13733 1029 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 FAM180AQ6UWF9 173 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 C17orf80Q9BSJ5 609 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 XPO7Q9UIA9 1087 aaKnown RBP15.59■□□□□ 0.09
SCN3B-201ENST00000299333 CCDC78A2IDD5 438 aa15.58■□□□□ 0.09
SCN3B-201ENST00000299333 PLA2G4AP47712 749 aa15.58■□□□□ 0.09
SCN3B-201ENST00000299333 OTUD4Q01804 1114 aaKnown RBP15.58■□□□□ 0.09
SCN3B-201ENST00000299333 RASGRF1Q13972 1273 aa15.58■□□□□ 0.09
SCN3B-201ENST00000299333 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.09
SCN3B-201ENST00000299333 SERPINB13Q9UIV8 391 aa15.58■□□□□ 0.09
SCN3B-201ENST00000299333 C5orf58C9J3I9 102 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 APRTP07741 180 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 OVGP1Q12889 678 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 ANKRD40Q6AI12 368 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 PADI6Q6TGC4 694 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 BNIPLQ7Z465 357 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 PLEKHF1Q96S99 279 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 CELF4Q9BZC1 486 aaKnown RBP15.58■□□□□ 0.08
SCN3B-201ENST00000299333 PIH1D3Q9NQM4 214 aaKnown RBP15.58■□□□□ 0.08
SCN3B-201ENST00000299333 ATP10DQ9P241 1426 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 FOXP2O15409 715 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 KCNJ6P48051 423 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 DPP9Q86TI2 863 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 MPP4Q96JB8 637 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 ERVV-2B6SEH9 535 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 MYL2P10916 166 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 KCNA6P17658 529 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 COPAP53621 1224 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 CHI3L2Q15782 390 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 BARGINQ6ZT62 677 aa15.58■□□□□ 0.08
SCN3B-201ENST00000299333 TAF4O00268 1085 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 PSMC3P17980 439 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 NUDT2P50583 147 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 KIZQ2M2Z5 673 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 EFHC2Q5JST6 749 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 JAMLQ86YT9 394 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 GANCQ8TET4 914 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 PLEKHA8Q96JA3 519 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 FAM153AQ9UHL3 310 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ZBTB39O15060 712 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 CYTH3O43739 400 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 TBXAS1P24557 533 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 OASLQ15646 514 aaKnown RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 PRUNE1Q86TP1 453 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 MYCBPAPQ8TBZ2 947 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ROPN1BQ9BZX4 212 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ROPN1Q9HAT0 212 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ADD3Q9UEY8 706 aaKnown RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ITGB1BP2Q9UKP3 347 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 DSEQ9UL01 958 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 LRFN2Q9ULH4 789 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 NEDD4P46934 1319 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 A0A1B0GTH6 734 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 CYP26A1O43174 497 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 RTN2O75298 545 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 WEE2P0C1S8 567 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 NFKBIAP25963 317 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 GJA8P48165 433 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 STXBP2Q15833 593 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SLC18A3Q16572 532 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 RAD9BQ6WBX8 426 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ZNF483Q8TF39 744 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SMAD5Q99717 465 aaKnown RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 FAM118BQ9BPY3 351 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 TRIM54Q9BYV2 358 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SP110Q9HB58 689 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 KIAA1586Q9HCI6 787 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 H2AFY2Q9P0M6 372 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 ZNF521Q96K83 1311 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 KRT87PA6NCN2 255 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SPDYE5A6NIY4 337 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SASH1O94885 1247 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 USP10Q14694 798 aaKnown RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 TRIP4Q15650 581 aaPredicted RBP15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SPDYE7PQ495Y7 208 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 SLC10A5Q5PT55 438 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 THEMIS2Q5TEJ8 643 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 KDM7AQ6ZMT4 941 aa15.57■□□□□ 0.08
SCN3B-201ENST00000299333 E2F7Q96AV8 911 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms