RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 KIF3CO14782 793 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 STAG3L1P0CL83 205 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 TCP1P17987 556 aaKnown RBP27.53■■■□□ 2
SDCCAG3-201ENST00000298537 MFSD10Q14728 455 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 TMEM270Q6UE05 265 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 DAAM2Q86T65 1068 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 ANK1P16157 1881 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 SREBF2Q12772 1141 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 CCDC102AQ96A19 550 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 PCDHB4Q9Y5E5 795 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 ATP8B3O60423 1300 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 LACTBL1A8MY62 500 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 ZEB2O60315 1214 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 TM4SF4P48230 202 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 TRIM32Q13049 653 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 DUOXA2Q1HG44 320 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 C2CD6Q53TS8 623 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 PKNOX2Q96KN3 472 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 ADAMTS10Q9H324 1103 aa27.52■■■□□ 2
SDCCAG3-201ENST00000298537 GPBP1L1Q9HC44 474 aaPredicted RBP27.52■■■□□ 2
SDCCAG3-201ENST00000298537 ASS1P00966 412 aaKnown RBP27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 ENOSF1Q7L5Y1 443 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 SLFN11Q7Z7L1 901 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 OSMRQ99650 979 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 TREHO43280 583 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 CA12O43570 354 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 SCARA5Q6ZMJ2 495 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 PHLDB2Q86SQ0 1253 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 SOCS4Q8WXH5 440 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 RPF1Q9H9Y2 349 aaKnown RBP27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 STXBP5LQ9Y2K9 1186 aa27.51■■□□□ 1.99
SDCCAG3-201ENST00000298537 AOC2O75106 756 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 RTN2O75298 545 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 GPR32O75388 356 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 KIF4AO95239 1232 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 PSMC4P43686 418 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 GUCY2FP51841 1108 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 CKAP4Q07065 602 aaKnown RBP27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 LLGL2Q6P1M3 1020 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 NT5DC3Q86UY8 548 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 CPNE8Q86YQ8 564 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 TRIB2Q92519 343 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 TRIP12Q14669 1992 aaPredicted RBP27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 TMEM191BP0C7N4 346 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 CYP2C9P11712 490 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 CD58P19256 250 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 PSEN2P49810 448 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 JADE1Q6IE81 842 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 DNAJB3Q8WWF6 145 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 BTBD6Q96KE9 485 aa27.5■■□□□ 1.99
SDCCAG3-201ENST00000298537 DCAF8L1A6NGE4 600 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 KCNK3O14649 394 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 B4GALT4O60513 344 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 SLC10A6Q3KNW5 377 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 PASD1Q8IV76 773 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 SPATA4Q8NEY3 305 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 XYLT2Q9H1B5 865 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 SIX4Q9UIU6 781 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 NRCAMQ92823 1304 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 ZMYND10O75800 440 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 RPS6KA1Q15418 735 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 KCTD19Q17RG1 926 aaPredicted RBP27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 ZNF394Q53GI3 561 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 PEX26Q7Z412 305 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 MSANTD4Q8NCY6 345 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 TMEM40Q8WWA1 233 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 CPA5Q8WXQ8 436 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 RNF19AQ9NV58 838 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 CTTNBP2NLQ9P2B4 639 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 POLIQ9UNA4 740 aa27.49■■□□□ 1.99
SDCCAG3-201ENST00000298537 ERLIN2O94905 339 aa27.48■■□□□ 1.99
SDCCAG3-201ENST00000298537 WEE2P0C1S8 567 aa27.48■■□□□ 1.99
SDCCAG3-201ENST00000298537 VSNL1P62760 191 aa27.48■■□□□ 1.99
SDCCAG3-201ENST00000298537 RBBP8NLQ8NC74 664 aaPredicted RBP27.48■■□□□ 1.99
SDCCAG3-201ENST00000298537 RRN3P2A6NIE6 340 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 TMEM88BA6NKF7 163 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 HAS3O00219 553 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 KRT19P08727 400 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 MCF2P10911 925 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 GZMAP12544 262 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 HOXA11P31270 313 aaPredicted RBP27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 ADAM17P78536 824 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 IFI16Q16666 785 aaKnown RBP27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 C1orf127Q8N9H9 656 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 AP5M1Q9H0R1 490 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 A0A1B0GUA9 196 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 MBLAC1A4D2B0 266 aaPredicted RBP27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 GPC5P78333 572 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 FSCN1Q16658 493 aaKnown RBP27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 CLEC16AQ2KHT3 1053 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 CCDC181Q5TID7 509 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 UBR7Q8N806 425 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 CYFIP2Q96F07 1278 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 ABCB6Q9NP58 842 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 RBM12Q9NTZ6 932 aaKnown RBP27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 TSKSQ9UJT2 592 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 PCDHB2Q9Y5E7 798 aa27.47■■□□□ 1.99
SDCCAG3-201ENST00000298537 RAP1GAPP47736 663 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 FLT3LGP49771 235 aa27.46■■□□□ 1.99
SDCCAG3-201ENST00000298537 TRPC3Q13507 836 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms