RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 MAPK6Q16659 721 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 TMEM132AQ24JP5 1023 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 EARS2Q5JPH6 523 aaKnown RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 ADALQ6DHV7 355 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 ZNF852Q6ZMS4 543 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 RBM43Q6ZSC3 357 aaKnown RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 NPAS3Q8IXF0 933 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 ST13P5Q8NFI4 369 aaPredicted RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 ITFG1Q8TB96 612 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 NELL1Q92832 810 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 UROC1Q96N76 676 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 EPC1Q9H2F5 836 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 PDZD7Q9H5P4 517 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 AVENQ9NQS1 362 aaPredicted RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 DNMT3BQ9UBC3 853 aaKnown RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 CACNG4Q9UBN1 327 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 BACE2Q9Y5Z0 518 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 MORC2Q9Y6X9 1032 aaPredicted RBP11.61□□□□□ -0.55
RFC4-201ENST00000296273 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 MIA3Q5JRA6 1907 aa11.61□□□□□ -0.55
RFC4-201ENST00000296273 CACNA1AO00555 2505 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 PATJQ8NI35 1801 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 ACKR2O00590 384 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 TBC1D4O60343 1298 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 NEMFO60524 1076 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 LILRB5O75023 590 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 FGFR3P22607 806 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 U2AF2P26368 475 aaKnown RBP eCLIP11.6□□□□□ -0.554e-7■■□□□ 12.4
RFC4-201ENST00000296273 TXKP42681 527 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 LMNB2Q03252 620 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 ADCY1Q08828 1119 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 NR5A1Q13285 461 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 PPP2R5DQ14738 602 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 DCAF4L1Q3SXM0 396 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 TPRG1Q6ZUI0 275 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 ANKS3Q6ZW76 656 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 MAEAQ7L5Y9 396 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 DNASE1L2Q92874 299 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 TNFRSF25Q93038 417 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 CHAMP1Q96JM3 812 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 IER2Q9BTL4 223 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 RBSNQ9H1K0 784 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 TUFT1Q9NNX1 390 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 GPRC5CQ9NQ84 441 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 GJB4Q9NTQ9 266 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 TFIP11Q9UBB9 837 aaKnown RBP11.6□□□□□ -0.55
RFC4-201ENST00000296273 MTF2Q9Y483 593 aaPredicted RBP11.6□□□□□ -0.55
RFC4-201ENST00000296273 DMXL1Q9Y485 3027 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 ZNF292O60281 2723 aa11.6□□□□□ -0.55
RFC4-201ENST00000296273 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 ADAM12O43184 909 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 PPP6R2O75170 966 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 B3GAT3O94766 335 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 PRKCBP05771 671 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 PTPN2P17706 415 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 CD72P21854 359 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 TARSP26639 723 aaKnown RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 NAMPTP43490 491 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 NRLP54845 237 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 PPP2R5AQ15172 486 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 ELSPBP1Q96BH3 223 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 MTMR9Q96QG7 549 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 NACC1Q96RE7 527 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 TNMDQ9H2S6 317 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 FOXP1Q9H334 677 aaPredicted RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 CLSTN2Q9H4D0 955 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 PRMT8Q9NR22 394 aaPredicted RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 HCFC1R1Q9NWW0 138 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 SMG5Q9UPR3 1016 aaKnown RBP11.59□□□□□ -0.55
RFC4-201ENST00000296273 CDY1Q9Y6F8 540 aa11.59□□□□□ -0.55
RFC4-201ENST00000296273 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 MICAL2O94851 1124 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 LRG1P02750 347 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 RHOP08100 348 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 SPATA31C1P0DKV0 1188 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 ELF1P32519 619 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 EFNA5P52803 228 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 ATXN1P54253 815 aaKnown RBP11.58□□□□□ -0.56
RFC4-201ENST00000296273 FAM160A1Q05DH4 1040 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 STK38Q15208 465 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 UPP1Q16831 310 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 CATSPER3Q86XQ3 398 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 NOSTRINQ8IVI9 506 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 LINC00301Q8NCQ3 95 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 ZNF461Q8TAF7 563 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 DEPTORQ8TB45 409 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 MCRS1Q96EZ8 462 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 PDLIM2Q96JY6 352 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
RFC4-201ENST00000296273 RTKNQ9BST9 563 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 CCDC113Q9H0I3 377 aa11.58□□□□□ -0.56
RFC4-201ENST00000296273 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
RFC4-201ENST00000296273 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms