RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 NFICP08651 508 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 KRT5P13647 590 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 GRM5P41594 1212 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 MYL6P60660 151 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 TRPC3Q13507 836 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 JADE1Q6IE81 842 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 NOTUMQ6P988 496 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 APBB1IPQ7Z5R6 666 aaPredicted RBP24.56■■□□□ 1.52
PTX3-201ENST00000295927 NOP9Q86U38 636 aaKnown RBP24.56■■□□□ 1.52
PTX3-201ENST00000295927 SEPT11Q9NVA2 429 aaKnown RBP24.56■■□□□ 1.52
PTX3-201ENST00000295927 CAPN6Q9Y6Q1 641 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 UMODL1Q5DID0 1318 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 AXLP30530 894 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 RPUSD2Q8IZ73 545 aaKnown RBP24.55■■□□□ 1.52
PTX3-201ENST00000295927 RNF10Q8N5U6 811 aaKnown RBP24.55■■□□□ 1.52
PTX3-201ENST00000295927 PCSK9Q8NBP7 692 aaKnown RBP24.55■■□□□ 1.52
PTX3-201ENST00000295927 EIF2AQ9BY44 585 aaKnown RBP24.55■■□□□ 1.52
PTX3-201ENST00000295927 CELF4Q9BZC1 486 aaKnown RBP24.55■■□□□ 1.52
PTX3-201ENST00000295927 ATP8B3O60423 1300 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 TACC1O75410 805 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 CHRNB2P17787 502 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 TBXAS1P24557 533 aaPredicted RBP24.55■■□□□ 1.52
PTX3-201ENST00000295927 SGSM1Q2NKQ1 1148 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 PALB2Q86YC2 1186 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 TRIM58Q8NG06 486 aa24.55■■□□□ 1.52
PTX3-201ENST00000295927 TRIP11Q15643 1979 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 H2AFZP0C0S5 128 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 CYP11B1P15538 503 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 ACO1P21399 889 aaKnown RBP24.54■■□□□ 1.52
PTX3-201ENST00000295927 GTF2F1P35269 517 aaKnown RBP eCLIP24.54■■□□□ 1.52
PTX3-201ENST00000295927 MRPS6P82932 125 aaKnown RBP24.54■■□□□ 1.52
PTX3-201ENST00000295927 H2AFVQ71UI9 128 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 SESTD1Q86VW0 696 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 CCDC94Q9BW85 323 aaPredicted RBP24.54■■□□□ 1.52
PTX3-201ENST00000295927 GRIN2DO15399 1336 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 RALGAPA2Q2PPJ7 1873 aa24.54■■□□□ 1.52
PTX3-201ENST00000295927 HTTP42858 3142 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 BTNL10A8MVZ5 291 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 TMCO5BA8MYB1 307 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 BUB1O43683 1085 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 INHAP05111 366 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 PDE6CP51160 858 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 ARHGEF6Q15052 776 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 TAF3Q5VWG9 929 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 RNF180Q86T96 592 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 WNT8BQ93098 351 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 NOX5Q96PH1 765 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 SAGE1Q9NXZ1 904 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 INTUQ9ULD6 942 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 PIN4Q9Y237 131 aaKnown RBP24.53■■□□□ 1.52
PTX3-201ENST00000295927 MRFAP1Q9Y605 127 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 SERINC5Q86VE9 423 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 C1orf127Q8N9H9 656 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 SNTG2Q9NY99 539 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 TAS2R14Q9NYV8 317 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 CDY2AQ9Y6F7 541 aa24.53■■□□□ 1.52
PTX3-201ENST00000295927 ENC1O14682 589 aa24.52■■□□□ 1.52
PTX3-201ENST00000295927 SLU7O95391 586 aaKnown RBP24.52■■□□□ 1.52
PTX3-201ENST00000295927 GALCP54803 685 aa24.52■■□□□ 1.52
PTX3-201ENST00000295927 NAP1L1P55209 391 aaKnown RBP24.52■■□□□ 1.52
PTX3-201ENST00000295927 RSPH3Q86UC2 560 aa24.52■■□□□ 1.52
PTX3-201ENST00000295927 SLAIN1Q8ND83 568 aa24.52■■□□□ 1.52
PTX3-201ENST00000295927 XYLT2Q9H1B5 865 aa24.52■■□□□ 1.52
PTX3-201ENST00000295927 SIX4Q9UIU6 781 aa24.52■■□□□ 1.52
PTX3-201ENST00000295927 M0QZ92 97 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 MMEP08473 750 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 FMO1Q01740 532 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 CDR2Q01850 454 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 TMEM132DQ14C87 1099 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 ZNF699Q32M78 642 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 TMEM130Q8N3G9 435 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 DDX1Q92499 740 aaKnown RBP24.51■■□□□ 1.51
PTX3-201ENST00000295927 ALS2CR12Q96Q35 445 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 PCDHB18PQ96TA0 734 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 PCDHB4Q9Y5E5 795 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 TRPV2Q9Y5S1 764 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 ATP1A1P05023 1023 aaKnown RBP24.51■■□□□ 1.51
PTX3-201ENST00000295927 KRT19P08727 400 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 CD302Q8IX05 232 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 TRIM6Q9C030 488 aaPredicted RBP24.51■■□□□ 1.51
PTX3-201ENST00000295927 NIF3L1Q9GZT8 377 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 NOC2LQ9Y3T9 749 aaKnown RBP24.51■■□□□ 1.51
PTX3-201ENST00000295927 C2CD2Q9Y426 696 aa24.51■■□□□ 1.51
PTX3-201ENST00000295927 CALCAP01258 141 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 ITGB3P05106 788 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 PRMT2P55345 433 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 FAM228AQ86W67 206 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 PLEKHA5Q9HAU0 1116 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 CNTN6Q9UQ52 1028 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 HES2Q9Y543 173 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 FRMPD3Q5JV73 1810 aa24.5■■□□□ 1.51
PTX3-201ENST00000295927 ACLYP53396 1101 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 BPIFB4P59827 614 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 AMPD2Q01433 879 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 TMEM270Q6UE05 265 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 UBR7Q8N806 425 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 CXorf38Q8TB03 319 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 NXF3Q9H4D5 531 aaKnown RBP24.49■■□□□ 1.51
PTX3-201ENST00000295927 CDC23Q9UJX2 597 aa24.49■■□□□ 1.51
PTX3-201ENST00000295927 PCDHB2Q9Y5E7 798 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms