RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 NEMFO60524 1076 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 RECQL4O94761 1208 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 GUCY1B3Q02153 619 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 TUSC3Q13454 348 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 SNW1Q13573 536 aaKnown RBP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 NAB2Q15742 525 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 PSMD5Q16401 504 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 DCLRE1AQ6PJP8 1040 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 CATSPER3Q86XQ3 398 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 DIS3L2Q8IYB7 885 aaKnown RBP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 HACE1Q8IYU2 909 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 DCLK2Q8N568 766 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 NXPE3Q969Y0 559 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 CCDC43Q96MW1 224 aaKnown RBP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 TTPALQ9BTX7 342 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 KIFC3Q9BVG8 833 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 FZD8Q9H461 694 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 ARHGEF3Q9NR81 526 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 PRMT7Q9NVM4 692 aaPredicted RBP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 HCFC1R1Q9NWW0 138 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 POLIQ9UNA4 740 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 GDAQ9Y2T3 454 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 SIT1Q9Y3P8 196 aa10.26□□□□□ -0.77
CNOT9-202ENST00000295701 MTF2Q9Y483 593 aaPredicted RBP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 SF3B1O75533 1304 aaKnown RBP eCLIP10.26□□□□□ -0.77
CNOT9-202ENST00000295701 GPR179Q6PRD1 2367 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 LMNAP02545 664 aaKnown RBP10.25□□□□□ -0.77
CNOT9-202ENST00000295701 THP07101 528 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 C8AP07357 584 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 SP9P0CG40 484 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 XRCC6P12956 609 aaKnown RBP eCLIP10.25□□□□□ -0.77
CNOT9-202ENST00000295701 CD72P21854 359 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 MCM7P33993 719 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 WNT7BP56706 349 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 ECM1Q16610 540 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 FAM187BQ17R55 369 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 PPM1LQ5SGD2 360 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 CDCA2Q69YH5 1023 aaPredicted RBP10.25□□□□□ -0.77
CNOT9-202ENST00000295701 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 CD300LGQ6UXG3 332 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 GPR65Q8IYL9 337 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 KIAA2013Q8IYS2 634 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 MAML2Q8IZL2 1156 aaPredicted RBP10.25□□□□□ -0.77
CNOT9-202ENST00000295701 ING5Q8WYH8 240 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 PIK3R5Q8WYR1 880 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 WASF1Q92558 559 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 RMDN1Q96DB5 314 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 BRMS1Q9HCU9 246 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 SLC2A4RGQ9NR83 387 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 CDH7Q9ULB5 785 aa10.25□□□□□ -0.77
CNOT9-202ENST00000295701 I3L4J1 428 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 N4BP3O15049 544 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 AXIN1O15169 862 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 C1RP00736 705 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 PRKCBP05771 671 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 OR1D2P34982 312 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 BRCC3P46736 316 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 SKOR1P84550 965 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
CNOT9-202ENST00000295701 ZNF174Q15697 407 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 GLRA4Q5JXX5 417 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 NT5DC1Q5TFE4 455 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 C1orf210Q8IVY1 113 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 ZBTB8OSQ8IWT0 167 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 PJA1Q8NG27 643 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 SLC7A14Q8TBB6 771 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 FGF13Q92913 245 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 KXD1Q9BQD3 176 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 PLA2G2FQ9BZM2 168 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 CCDC113Q9H0I3 377 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 GOLGA2P5Q9HBQ8 144 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 DNMT3BQ9UBC3 853 aaKnown RBP10.24□□□□□ -0.77
CNOT9-202ENST00000295701 CITO14578 2027 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 CEP250Q9BV73 2442 aa10.24□□□□□ -0.77
CNOT9-202ENST00000295701 PATJQ8NI35 1801 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 F5P12259 2224 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 ACKR2O00590 384 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 CYP11B2P19099 503 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 TKTP29401 623 aaKnown RBP10.23□□□□□ -0.77
CNOT9-202ENST00000295701 STARD6P59095 220 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 FOXK2Q01167 660 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 CREMQ03060 361 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 MLF2Q15773 248 aaPredicted RBP10.23□□□□□ -0.77
CNOT9-202ENST00000295701 SLC44A4Q53GD3 710 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 AXDND1Q5T1B0 1012 aaPredicted RBP10.23□□□□□ -0.77
CNOT9-202ENST00000295701 LIN9Q5TKA1 542 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 TMEM130Q8N3G9 435 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 CEP120Q8N960 986 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 MCPH1Q8NEM0 835 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 ZNF775Q96BV0 537 aaPredicted RBP10.23□□□□□ -0.77
CNOT9-202ENST00000295701 MCRS1Q96EZ8 462 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 PRIMPOLQ96LW4 560 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 NACC1Q96RE7 527 aa10.23□□□□□ -0.77
CNOT9-202ENST00000295701 POLR3CQ9BUI4 534 aaPredicted RBP10.23□□□□□ -0.77
CNOT9-202ENST00000295701 TUFT1Q9NNX1 390 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms