RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 PTPRJQ12913 1337 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 RALGAPA2Q2PPJ7 1873 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 CASTOR2A6NHX0 329 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 C5orf67F2Z3F1 127 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 TULP1O00294 542 aaPredicted RBP24.44■■□□□ 1.5
LINC01116-201ENST00000295549 SOX1O00570 391 aaPredicted RBP24.44■■□□□ 1.5
LINC01116-201ENST00000295549 OR1G1P47890 313 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 ZNF165P49910 485 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 DLG4P78352 724 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 CCDC40Q4G0X9 1142 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 EPC2Q52LR7 807 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 LMBRD2Q68DH5 695 aaPredicted RBP24.44■■□□□ 1.5
LINC01116-201ENST00000295549 IRF2BP1Q8IU81 584 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 OR5B17Q8NGF7 314 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 PAAF1Q9BRP4 392 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 DPP3Q9NY33 737 aa24.44■■□□□ 1.5
LINC01116-201ENST00000295549 CHD9Q3L8U1 2897 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 TRIP11Q15643 1979 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 TMEM191BP0C7N4 346 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 PPM1AP35813 382 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 PBX3P40426 434 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 CLCNKBP51801 687 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 C1orf220Q5T0J3 134 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 DCLRE1AQ6PJP8 1040 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 LRSAM1Q6UWE0 723 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 SPRED2Q7Z698 418 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 ZNF516Q92618 1163 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 COLEC11Q9BWP8 271 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 MTMR12Q9C0I1 747 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 SPG21Q9NZD8 308 aa24.43■■□□□ 1.5
LINC01116-201ENST00000295549 ANO9A1A5B4 782 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 TNNC2P02585 160 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 GTF2H1P32780 548 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 CTNNB1P35222 781 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 GUCY2FP51841 1108 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 ZNF445P59923 1031 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 NCAPHQ15003 741 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 FAM114A1Q8IWE2 563 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 SLC39A11Q8N1S5 342 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 C1orf127Q8N9H9 656 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 IGSF21Q96ID5 467 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 CACNG4Q9UBN1 327 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 ITGA11Q9UKX5 1188 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 PRG3Q9Y2Y8 225 aaPredicted RBP24.42■■□□□ 1.5
LINC01116-201ENST00000295549 GBF1Q92538 1859 aa24.42■■□□□ 1.5
LINC01116-201ENST00000295549 ANK1P16157 1881 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 NT5C1B-RDH14C9J2C7 533 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 TMEM189-UBE2V1I3L0A0 370 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 PODXLO00592 558 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 PIRO00625 290 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 C9orf57Q5W0N0 161 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 TRAPPC11Q7Z392 1133 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 TRIM59Q8IWR1 403 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 CXorf38Q8TB03 319 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 SLC35C1Q96A29 364 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 CNOT6LQ96LI5 555 aaKnown RBP24.41■■□□□ 1.5
LINC01116-201ENST00000295549 ZNF576Q9H609 170 aa24.41■■□□□ 1.5
LINC01116-201ENST00000295549 SAMSN1Q9NSI8 373 aaKnown RBP24.41■■□□□ 1.5
LINC01116-201ENST00000295549 TDRD15B5MCY1 1934 aaKnown RBP24.4■■□□□ 1.5
LINC01116-201ENST00000295549 SMTNL1A8MU46 457 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 STX10O60499 249 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 C4BPAP04003 597 aaKnown RBP24.4■■□□□ 1.5
LINC01116-201ENST00000295549 TRIM49P0CI25 452 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 TRIM49CP0CI26 452 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 PLCB3Q01970 1234 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 TMEM173Q86WV6 379 aaPredicted RBP24.4■■□□□ 1.5
LINC01116-201ENST00000295549 DHX40Q8IX18 779 aaKnown RBP24.4■■□□□ 1.5
LINC01116-201ENST00000295549 AOPEPQ8N6M6 819 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 KLHL23Q8NBE8 558 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 RABGGTAQ92696 567 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 FAM84AQ96KN4 292 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 C11orf84Q9BUA3 381 aaPredicted RBP24.4■■□□□ 1.5
LINC01116-201ENST00000295549 MARCH5Q9NX47 278 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 MTUS1Q9ULD2 1270 aa24.4■■□□□ 1.5
LINC01116-201ENST00000295549 FGF18O76093 207 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 B3GAT3O94766 335 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 PPP3CAQ08209 521 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 IQCB1Q15051 598 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 CDKAL1Q5VV42 579 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 TCERG1LQ5VWI1 586 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 GPR153Q6NV75 609 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 C15orf39Q6ZRI6 1047 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 SV2AQ7L0J3 742 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 TMEM130Q8N3G9 435 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 LRCH3Q96II8 777 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 FANCLQ9NW38 375 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 SIX4Q9UIU6 781 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 ADAM28Q9UKQ2 775 aa24.39■■□□□ 1.5
LINC01116-201ENST00000295549 PDCD11Q14690 1871 aaKnown RBP24.39■■□□□ 1.49
LINC01116-201ENST00000295549 CHD7Q9P2D1 2997 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 F8W810 466 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 KIF4AO95239 1232 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 ITGB3P05106 788 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 PAX3P23760 479 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 RBP5P82980 135 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 KRT17Q04695 432 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 ZACNQ401N2 412 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 DCAF17Q5H9S7 520 aaPredicted RBP24.38■■□□□ 1.49
LINC01116-201ENST00000295549 TDRD10Q5VZ19 366 aaKnown RBP24.38■■□□□ 1.49
LINC01116-201ENST00000295549 CD300LGQ6UXG3 332 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms