RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TPP2P29144 1249 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-202ENST00000293880 CCDC33Q8N5R6 958 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 MAGEB5Q9BZ81 275 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 PITPNM2Q9BZ72 1349 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 RERGLQ9H628 205 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 KDM5CP41229 1560 aa16.95■□□□□ 0.3
SSRP1-202ENST00000293880 SMNDC1O75940 238 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 APRTP07741 180 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 GRAPQ13588 217 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 SYTL3Q4VX76 610 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 C9orf72Q96LT7 481 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 CDYLQ9Y232 598 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ZHX2Q9Y6X8 837 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ZBTB39O15060 712 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 EIF3HO15372 352 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 PHF2O75151 1096 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 SKAP2O75563 359 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 RHOBTB1O94844 696 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 SERPINB10P48595 397 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ZNF235Q14590 738 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ITPRIPL1Q6GPH6 555 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 IYDQ6PHW0 289 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ZFATQ9P243 1243 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 KRT7P08729 469 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 SERPINB1P30740 379 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 S100A5P33763 92 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 TMC5Q6UXY8 1006 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 TBXAS1P24557 533 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 SOAT1P35610 550 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 TPI1P60174 286 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 TMEM179Q6ZVK1 233 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 SIX5Q8N196 739 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 GOLPH3Q9H4A6 298 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 TRIM45Q9H8W5 580 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 RTN2O75298 545 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 FKBP9O95302 570 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 CPB1P15086 417 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 IREB2P48200 963 aaKnown RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 DHX34Q14147 1143 aaKnown RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 FKBP9P1Q75LS8 142 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 FASTKD5Q7L8L6 764 aaKnown RBP16.94■□□□□ 0.3
SSRP1-202ENST00000293880 ADCK2Q7Z695 626 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 DIABLOQ9NR28 239 aa16.94■□□□□ 0.3
SSRP1-202ENST00000293880 RAD51CO43502 376 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 MYBP10242 640 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 PTK7Q13308 1070 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 HORMAD1Q86X24 394 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 URGCPQ8TCY9 931 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 FEM1BQ9UK73 627 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 SMAPO00193 183 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 CAPN1P07384 714 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 CCDC149Q6ZUS6 474 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 NLRP9Q7RTR0 991 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 RFFLQ8WZ73 363 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 STAMBPL1Q96FJ0 436 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 TARSL2A2RTX5 802 aaKnown RBP16.93■□□□□ 0.3
SSRP1-202ENST00000293880 DPYSL4O14531 572 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 CSE1LP55060 971 aaKnown RBP16.93■□□□□ 0.3
SSRP1-202ENST00000293880 MED21Q13503 144 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 GRM4Q14833 912 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 C6orf10Q5SRN2 563 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-202ENST00000293880 C5orf58C9J3I9 102 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 PDE5AO76074 875 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 ETFBP38117 255 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 NME5P56597 212 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 MAPRE2Q15555 327 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 BTBD8Q5XKL5 378 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 MB21D2Q8IYB1 491 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-202ENST00000293880 CD274Q9NZQ7 290 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 CAND2O75155 1236 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 ASMTLO95671 621 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 ACOT2P49753 483 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 PSMD7P51665 324 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
SSRP1-202ENST00000293880 GJB7Q6PEY0 223 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 MMP19Q99542 508 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 KDM4CQ9H3R0 1056 aa16.93■□□□□ 0.3
SSRP1-202ENST00000293880 NFKBIL1Q9UBC1 381 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-202ENST00000293880 POLRMTO00411 1230 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 STX3Q13277 289 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 USP10Q14694 798 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 SLC10A4Q96EP9 437 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 MRPL4Q9BYD3 311 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 MRPL1Q9BYD6 325 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 MYO3BQ8WXR4 1341 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 ARAP3Q8WWN8 1544 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 MYL2P10916 166 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 SEC24CP53992 1094 aa16.92■□□□□ 0.3
SSRP1-202ENST00000293880 CYLC2Q14093 348 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
SSRP1-202ENST00000293880 BBS2Q9BXC9 721 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms