RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 TAAR1Q96RJ0 339 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 STK33Q9BYT3 514 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 E9PCH4 1651 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 FAM95CA0A1B0GW59 222 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 TBX3O15119 743 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 FGFR4P22455 802 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 AKT1P31749 480 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 SEMA3FQ13275 785 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 LRRC14Q15048 493 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 HIF1AQ16665 826 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 MMS22LQ6ZRQ5 1243 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 FAM96AQ9H5X1 160 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 EEF2KO00418 725 aaKnown RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 ACTR2P61160 394 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 ZNF507Q8TCN5 953 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 UBE2Q2LH0YL09 131 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 STILQ15468 1287 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 MFN1Q8IWA4 741 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 UBA3Q8TBC4 463 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 ZC3H15Q8WU90 426 aaKnown RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 SCHIP1Q9P0W5 487 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 TEKT2Q9UIF3 430 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 PDS5AQ29RF7 1337 aaKnown RBP18.21■□□□□ 0.51
SHANK1-201ENST00000293441 HBP1O60381 514 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 SCFD2Q8WU76 684 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 DOLKQ9UPQ8 538 aa18.21■□□□□ 0.51
SHANK1-201ENST00000293441 PYGBP11216 843 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 TCF7P36402 384 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 RNF180Q86T96 592 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 SLC7A14Q8TBB6 771 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 SUFUQ9UMX1 484 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 C3orf70A6NLC5 250 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 WEE2P0C1S8 567 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 EEF1DP29692 281 aaKnown RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 DEUP1Q05D60 604 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 TEX12Q9BXU0 123 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 LIMA1Q9UHB6 759 aaKnown RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 GUCY2CP25092 1073 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 PDAP1Q13442 181 aaKnown RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 GOLGA7BQ2TAP0 167 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 RGS9BPQ6ZS82 235 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 ZNF512BQ96KM6 892 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 TSSK1BQ9BXA7 367 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 AMACRQ9UHK6 382 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 ZNF197O14709 1029 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 GFAPP14136 432 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 CENPKQ9BS16 269 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 ZFATQ9P243 1243 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 APRTP07741 180 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 PNMA6AP0CW24 399 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-201ENST00000293441 ALDH1A3P47895 512 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 COBLL1Q53SF7 1204 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 EXOC4Q96A65 974 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 NT5C1AQ9BXI3 368 aa18.2■□□□□ 0.5
SHANK1-201ENST00000293441 AARSP49588 968 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHANK1-201ENST00000293441 MS4A14Q96JA4 679 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 EML4Q9HC35 981 aaKnown RBP18.19■□□□□ 0.5
SHANK1-201ENST00000293441 KCNH7Q9NS40 1196 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 SFMBT1Q9UHJ3 866 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 SCOCQ9UIL1 159 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 C17orf102A2RUQ5 167 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 SKIP12755 728 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 DPYDQ12882 1025 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 C1orf146Q5VVC0 180 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 ADCK2Q7Z695 626 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 SENP2Q9HC62 589 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 KCND2Q9NZV8 630 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 USP42Q9H9J4 1324 aaKnown RBP18.19■□□□□ 0.5
SHANK1-201ENST00000293441 USP27XA6NNY8 438 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 HLA-DRAP01903 254 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 LAMC2Q13753 1193 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 NOTUMQ6P988 496 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 GTF2A2P52657 109 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 PPP2R2AP63151 447 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 DHX34Q14147 1143 aaKnown RBP18.19■□□□□ 0.5
SHANK1-201ENST00000293441 MTF1Q14872 753 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 DCP1BQ8IZD4 617 aaKnown RBP18.19■□□□□ 0.5
SHANK1-201ENST00000293441 PI4K2AQ9BTU6 479 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 POLR1AO95602 1720 aaPredicted RBP18.19■□□□□ 0.5
SHANK1-201ENST00000293441 CD163L1Q9NR16 1453 aa18.19■□□□□ 0.5
SHANK1-201ENST00000293441 THPOP40225 353 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ALG13Q9NP73 1137 aaKnown RBP18.18■□□□□ 0.5
SHANK1-201ENST00000293441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHANK1-201ENST00000293441 WDR35Q9P2L0 1181 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 TECPR2O15040 1411 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 KLRK1P26718 216 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ASPSCR1Q9BZE9 553 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 NEUROG2Q9H2A3 272 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 GOLGA8RI6L899 631 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 NLRP11P59045 1033 aaKnown RBP18.18■□□□□ 0.5
SHANK1-201ENST00000293441 ELMO2Q96JJ3 720 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 SETBP1Q9Y6X0 1596 aa18.18■□□□□ 0.5
SHANK1-201ENST00000293441 H0Y3Z8 333 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms