RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 KRT72Q14CN4 511 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 ANKMY2Q8IV38 441 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 KIF2BQ8N4N8 673 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 BCL9O00512 1426 aa11.31□□□□□ -0.6
PKNOX1-201ENST00000291547 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 CDH16O75309 829 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 ABCE1P61221 599 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 FOXO4P98177 505 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 GRIN1Q05586 938 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 ACAP3Q96P50 834 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 C10orf88Q9H8K7 445 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 FBXO2Q9UK22 296 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 ORC4O43929 436 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 ATXN3P54252 364 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 COBLL1Q53SF7 1204 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 CDKL3Q8IVW4 592 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF34Q8IZ26 560 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 RFWD2Q8NHY2 731 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 SEC16BQ96JE7 1060 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 XPO6Q96QU8 1125 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 KIAA1586Q9HCI6 787 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 SNX12Q9UMY4 172 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 H0YC42 278 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 GGPS1O95749 300 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 MARK3P27448 753 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 ITPRIPL1Q6GPH6 555 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 TTC23LQ6PF05 361 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 TRPM8Q7Z2W7 1104 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 AFF4Q9UHB7 1163 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 LZTS3O60299 673 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 GNAT1P11488 350 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 CTCFP49711 727 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 STX3Q13277 289 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 GRAPQ13588 217 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 SMIM5Q71RC9 77 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 GGA2Q9UJY4 613 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 STAP1Q9ULZ2 295 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 L1RE1Q9UN81 338 aa11.3□□□□□ -0.6
PKNOX1-201ENST00000291547 B2RBV5 119 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF197O14709 1029 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 COASYQ13057 564 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 CEP78Q5JTW2 689 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 BTN2A2Q8WVV5 523 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 TUBGCP3Q96CW5 907 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 ABHD8Q96I13 439 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 MRPL1Q9BYD6 325 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 FAM49AQ9H0Q0 323 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 PFASO15067 1338 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 PITPNM2Q9BZ72 1349 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 ATP9BO43861 1147 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 TBC1D4O60343 1298 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 LSP1P33241 339 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 WDR93Q6P2C0 686 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 C4orf33Q8N1A6 199 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 PPHLN1Q8NEY8 458 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 ATL2Q8NHH9 583 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 DHX35Q9H5Z1 703 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 BCS1LQ9Y276 419 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 MAFGO15525 162 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 RPS6P62753 249 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 NFX1Q12986 1120 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 RBBP7Q16576 425 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 KNOP1Q1ED39 458 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 C1orf228Q6PIY5 440 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 PID1Q7Z2X4 250 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 EML4Q9HC35 981 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 DDX56Q9NY93 547 aaKnown RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 M0QYV0 167 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 ZNF185O15231 689 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 ATP6V1B1P15313 513 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 GNA15P30679 374 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 CDH6P55285 790 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 TRIM16LQ309B1 348 aa11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-201ENST00000291547 INTS5Q6P9B9 1019 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms