RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 KCNN1Q92952 543 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 ARMCX3Q9UH62 379 aaPredicted RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 FRMD4BQ9Y2L6 1034 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 CHD7Q9P2D1 2997 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 LRRIQ3A6PVS8 624 aaPredicted RBP12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 H0YCG3 227 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 CLSTN1O94985 981 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 EPB41P11171 864 aaKnown RBP12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 ACTN1P12814 892 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 AKAP5P24588 427 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 GCLMP48507 274 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 MCL1Q07820 350 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 KCNH2Q12809 1159 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 NFIL3Q16649 462 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 UBXN11Q5T124 520 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 MMGT1Q8N4V1 131 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 FBXL18Q96ME1 805 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 TRIM10Q9UDY6 481 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 PADI3Q9ULW8 664 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 TNFSF13BQ9Y275 285 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 CEP290O15078 2479 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 GARTP22102 1010 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 CYP2C18P33260 490 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 BFSP1Q12934 665 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 ENOX2Q16206 610 aaKnown RBP12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 WNT8AQ9H1J5 351 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 VPS18Q9P253 973 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 ANK1P16157 1881 aa12.37□□□□□ -0.43
CHRNB3-201ENST00000289957 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 PJA2O43164 708 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 NBNO60934 754 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 TNFRSF8P28908 595 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 LMAN1P49257 510 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 GUCY2FP51841 1108 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 KCNMA1Q12791 1236 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 NME8Q8N427 588 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 LPPQ93052 612 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 SNTG2Q9NY99 539 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 RBAKQ9NYW8 714 aaPredicted RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 KLK14Q9P0G3 267 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 CACNG4Q9UBN1 327 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 HPCAL4Q9UM19 191 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 PLAGL2Q9UPG8 496 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 FAN1Q9Y2M0 1017 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 TNRC18O15417 2968 aaPredicted RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 EXTL3O43909 919 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 STAG3L1P0CL83 205 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 VAMP7P51809 220 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 KIF5AQ12840 1032 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 FRMD5Q7Z6J6 570 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 PARD3BQ8TEW8 1205 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 COG1Q8WTW3 980 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 VWCEQ96DN2 955 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 C11orf49Q9H6J7 331 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 AJAP1Q9UKB5 411 aaPredicted RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 JRKLQ9Y4A0 524 aa12.36□□□□□ -0.43
CHRNB3-201ENST00000289957 M0QZ92 97 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 TACC1O75410 805 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 SLC9A1P19634 815 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 GLRA4Q5JXX5 417 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 CCDC70Q6NSX1 233 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 RTN4RL1Q86UN2 441 aaPredicted RBP12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 SMG8Q8ND04 991 aaKnown RBP12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 LINC01599Q8WXQ3 324 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 MFSD14AQ96MC6 490 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 FAM207AQ9NSI2 230 aaPredicted RBP12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 EYSQ5T1H1 3165 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 TRIM43BA6NCK2 446 aa12.35□□□□□ -0.43
CHRNB3-201ENST00000289957 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms