RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 KIF2CQ99661 725 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 CYP4F11Q9HBI6 524 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 PTPRHQ9HD43 1115 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 CNTN3Q9P232 1028 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 SMC3Q9UQE7 1217 aa15.34■□□□□ 0.05
TPM1-202ENST00000288398 ZNF197O14709 1029 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 XPOTO43592 962 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 KRT18P05783 430 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 DCNP07585 359 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 RHOP08100 348 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 PLA2G4BP0C869 781 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 PTPN2P17706 415 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 GJB2P29033 226 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 MCM2P49736 904 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 LIG4P49917 911 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 ROR1Q01973 937 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 PRKCQQ04759 706 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 SOX4Q06945 474 aaPredicted RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 MAPK7Q13164 816 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 IL17AQ16552 155 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 KYAT1Q16773 422 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 C8orf34Q49A92 452 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 XKR4Q5GH76 650 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 ARL6IP4Q66PJ3 421 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 IQCEQ6IPM2 695 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 ALKAL1Q6UXT8 129 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 ZPBP2Q6X784 338 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 KCNK18Q7Z418 384 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 NPAS3Q8IXF0 933 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 SYT2Q8N9I0 419 aaPredicted RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 C3orf58Q8NDZ4 430 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 KXD1Q9BQD3 176 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 NTPCRQ9BSD7 190 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 MMTAG2Q9BU76 263 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 BCO2Q9BYV7 579 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 SEMA4AQ9H3S1 761 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 HCFC1R1Q9NWW0 138 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 GDE1Q9NZC3 331 aa15.33■□□□□ 0.04
TPM1-202ENST00000288398 DNMT3BQ9UBC3 853 aaKnown RBP15.33■□□□□ 0.04
TPM1-202ENST00000288398 MAPTP10636 758 aaKnown RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 CPB1P15086 417 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 PROZP22891 400 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 UBA7P41226 1012 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 PPP2R3AQ06190 1150 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 SNW1Q13573 536 aaKnown RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 UBXN2BQ14CS0 331 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 MLF2Q15773 248 aaPredicted RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 HYIQ5T013 277 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 CYP4A22Q5TCH4 519 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 TPGS2Q68CL5 300 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 RSPO2Q6UXX9 243 aaPredicted RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 PDZD4Q76G19 769 aaPredicted RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 TAS1R3Q7RTX0 852 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 ADSSL1Q8N142 457 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 TMEM161BQ8NDZ6 487 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 PJA1Q8NG27 643 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 MCRS1Q96EZ8 462 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 TMX3Q96JJ7 454 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 AK8Q96MA6 479 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 ZMAT2Q96NC0 199 aaKnown RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 HINFPQ9BQA5 517 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 CORO1BQ9BR76 489 aa15.32■□□□□ 0.04
TPM1-202ENST00000288398 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.32■□□□□ 0.04
TPM1-202ENST00000288398 HNRNPDLO14979 420 aaKnown RBP15.31■□□□□ 0.04
TPM1-202ENST00000288398 SLC26A4O43511 780 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 TBCAO75347 108 aaKnown RBP15.31■□□□□ 0.04
TPM1-202ENST00000288398 FAM13AO94988 1023 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 BMP15O95972 392 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 CLTAP09496 248 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 ATF2P15336 505 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 SCP2P22307 547 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 DHX8Q14562 1220 aaKnown RBP15.31■□□□□ 0.04
TPM1-202ENST00000288398 SLC44A4Q53GD3 710 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 USP37Q86T82 979 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 C1orf210Q8IVY1 113 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 KIF12Q96FN5 646 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
TPM1-202ENST00000288398 SUSD3Q96L08 255 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
TPM1-202ENST00000288398 TBC1D32Q96NH3 1257 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 RPP25Q9BUL9 199 aaKnown RBP15.31■□□□□ 0.04
TPM1-202ENST00000288398 FOXQ1Q9C009 403 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 ZHX3Q9H4I2 956 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 PLEKHA5Q9HAU0 1116 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 FBXL5Q9UKA1 691 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 INSL5Q9Y5Q6 135 aa15.31■□□□□ 0.04
TPM1-202ENST00000288398 KANSL1LA0AUZ9 987 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 ARHGEF37A1IGU5 675 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 WDR27A2RRH5 827 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 K7ENM7 598 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 NCAM2O15394 837 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 ECI2O75521 394 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 ABLIM3O94929 683 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 LMNAP02545 664 aaKnown RBP15.3■□□□□ 0.04
TPM1-202ENST00000288398 CXCL8P10145 99 aa15.3■□□□□ 0.04
TPM1-202ENST00000288398 IGFBP6P24592 240 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms