RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 LAMA3Q16787 3333 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 ZBBXA8MT70 800 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 STX10O60499 249 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 B4GALT3O60512 393 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 DGKIO75912 1065 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 AMHP03971 560 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 TPM2P07951 284 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 KLK7P49862 253 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 ZNF75DP51815 510 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 AP3M2P53677 418 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 EPC2Q52LR7 807 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 DPY19L2P1Q6NXN4 242 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 ANKRD36BP1Q96IX9 119 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 DPP3Q9NY33 737 aa23.55■■□□□ 1.36
PDLIM3-203ENST00000284771 ADCY5O95622 1261 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 SLC9A1P19634 815 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 IGFBP6P24592 240 aaPredicted RBP23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 MYL7Q01449 175 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 APBA1Q02410 837 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 NOMO2Q5JPE7 1267 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 C9orf50Q5SZB4 431 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 FAM117BQ6P1L5 589 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 ZNF280BQ86YH2 543 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 CACTINQ8WUQ7 758 aaKnown RBP23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 ERGIC2Q96RQ1 377 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 TSPAN18Q96SJ8 248 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 TBC1D13Q9NVG8 400 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 UBQLN1Q9UMX0 589 aaKnown RBP23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 GTPBP10A4D1E9 387 aaKnown RBP23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 P4HA2O15460 535 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 DDHD2O94830 711 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 ITGB3P05106 788 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 BIRC3Q13489 604 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 RASIP1Q5U651 963 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 FBXL13Q8NEE6 735 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 PAAF1Q9BRP4 392 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 RC3H2Q9HBD1 1191 aaKnown RBP23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 HCSTQ9UBK5 93 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 SIK3Q9Y2K2 1263 aa23.54■■□□□ 1.36
PDLIM3-203ENST00000284771 SCN1AP35498 2009 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 PPEF2O14830 753 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 TNNC2P02585 160 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 CYP3A5P20815 502 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 PON1P27169 355 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 KCNJ6P48051 423 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 SYCP1Q15431 976 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 FKBP15Q5T1M5 1219 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 ZNF689Q96CS4 500 aaPredicted RBP23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 RAB20Q9NX57 234 aa23.53■■□□□ 1.36
PDLIM3-203ENST00000284771 H0YGN5 161 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 CBFA2T2O43439 604 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 N4BP1O75113 896 aaKnown RBP23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 HLA-DRAP01903 254 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 GRIK3Q13003 919 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 EXOC3L4Q17RC7 722 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 EHBP1Q8NDI1 1231 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 MRFAP1L1Q96HT8 127 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 PI4K2AQ9BTU6 479 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 GCNT4Q9P109 453 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 PDE4DIPQ5VU43 2346 aa23.52■■□□□ 1.36
PDLIM3-203ENST00000284771 ANO9A1A5B4 782 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 TBKBP1A7MCY6 615 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 HOXA2O43364 376 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 MYL6P60660 151 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 DSC1Q08554 894 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 NCOA4Q13772 614 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 GBP6Q6ZN66 633 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 ABI1Q8IZP0 508 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 BEST2Q8NFU1 509 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 RABGGTAQ92696 567 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 GDF15Q99988 308 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 XYLT2Q9H1B5 865 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 SLC38A7Q9NVC3 462 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 RNF216Q9NWF9 866 aaPredicted RBP23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 KANSL3Q9P2N6 904 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 A0A1W2PQC6 194 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 PIRO00625 290 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 PHACTR2O75167 634 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 CAPN15O75808 1086 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 KRT19P08727 400 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 POLR2BP30876 1174 aaKnown RBP23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 SHHQ15465 462 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 C9orf57Q5W0N0 161 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 TRIM65Q6PJ69 517 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 SIX2Q9NPC8 291 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 ITGA11Q9UKX5 1188 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 AGAP1Q9UPQ3 857 aa23.51■■□□□ 1.35
PDLIM3-203ENST00000284771 CASTOR2A6NHX0 329 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 EPHB6O15197 1021 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 GJB5O95377 273 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 LRPAP1P30533 357 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 CLCNKBP51801 687 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 TUSC3Q13454 348 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 PAN2Q504Q3 1202 aaKnown RBP23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 SPOPLQ6IQ16 392 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 VSTM4Q8IW00 320 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 COLGALT2Q8IYK4 626 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 URGCPQ8TCY9 931 aa23.5■■□□□ 1.35
PDLIM3-203ENST00000284771 DNAJB4Q9UDY4 337 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms