RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ABCD1P33897 745 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 GJC1P36383 396 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 ORC1Q13415 861 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 TRPC3Q13507 836 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 OGTO15294 1046 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-201ENST00000279247 RRM1P23921 792 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 BRSK2Q8IWQ3 736 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 RBBP8NLQ8NC74 664 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-201ENST00000279247 CASKIN2Q8WXE0 1202 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 CCDC113Q9H0I3 377 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 FAM49AQ9H0Q0 323 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-201ENST00000279247 DPH5Q9H2P9 285 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 RNF19AQ9NV58 838 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 ANAPC7Q9UJX3 599 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 HPCAL4Q9UM19 191 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 DAAM1Q9Y4D1 1078 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 ERICH4A6NGS2 130 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 SSR1P43307 286 aaKnown RBP19.2■□□□□ 0.66
CAPN1-201ENST00000279247 ZPBP2Q6X784 338 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 IFT20Q8IY31 132 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 SHCBP1Q8NEM2 672 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 NLRP7Q8WX94 980 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 IGF2BP3O00425 579 aaKnown RBP eCLIP19.2■□□□□ 0.66
CAPN1-201ENST00000279247 TTI1O43156 1089 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 CLTAP09496 248 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 LAMC2Q13753 1193 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 TFDP1Q14186 410 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 TERF2Q15554 542 aa19.2■□□□□ 0.66
CAPN1-201ENST00000279247 C22orf31O95567 290 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 GZMAP12544 262 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 GGCXP38435 758 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 NSFP46459 744 aaKnown RBP19.19■□□□□ 0.66
CAPN1-201ENST00000279247 PPARDQ03181 441 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 ACAD10Q6JQN1 1059 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 ACTRT1Q8TDG2 376 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 ERVK-5Q9HDB9 667 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 DIS3Q9Y2L1 958 aaKnown RBP19.19■□□□□ 0.66
CAPN1-201ENST00000279247 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 IGKV6-21A0A0C4DH24 114 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 H3BRB1 525 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 SMPD1P17405 629 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 PDE4CQ08493 712 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 CLEC16AQ2KHT3 1053 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 EFCAB13Q8IY85 973 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 TSEN2Q8NCE0 465 aaKnown RBP19.19■□□□□ 0.66
CAPN1-201ENST00000279247 AENQ8WTP8 325 aaKnown RBP19.19■□□□□ 0.66
CAPN1-201ENST00000279247 TRIM51Q9BSJ1 452 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 TUT1Q9H6E5 874 aaKnown RBP19.19■□□□□ 0.66
CAPN1-201ENST00000279247 KAT6AQ92794 2004 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 ZBTB48P10074 688 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-201ENST00000279247 RAP1GAPP47736 663 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 CLDN10P78369 228 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 MPZL3Q6UWV2 235 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 DPH6Q7L8W6 267 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 NPLOC4Q8TAT6 608 aa19.19■□□□□ 0.66
CAPN1-201ENST00000279247 ACKR2O00590 384 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 KIAA0391O15091 583 aaKnown RBP19.18■□□□□ 0.66
CAPN1-201ENST00000279247 DYNC1LI2O43237 492 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-201ENST00000279247 ADCY6O43306 1168 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 SCP2P22307 547 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 CDCA2Q69YH5 1023 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-201ENST00000279247 ENOSF1Q7L5Y1 443 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 USTQ9Y2C2 406 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 GPR25O00155 361 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 FAM189A1O60320 539 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 BRD2P25440 801 aaKnown RBP19.18■□□□□ 0.66
CAPN1-201ENST00000279247 MAPK4P31152 587 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 PTENP60484 403 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 MBTD1Q05BQ5 628 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 DUOXA2Q1HG44 320 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 SAPCD2Q86UD0 394 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 OR6J1Q8NGC5 347 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 MAML3Q96JK9 1138 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 C2orf40Q9H1Z8 148 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 CDT1Q9H211 546 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 SETD4Q9NVD3 440 aa19.18■□□□□ 0.66
CAPN1-201ENST00000279247 ABT1Q9ULW3 272 aaKnown RBP19.18■□□□□ 0.66
CAPN1-201ENST00000279247 ZC3H11AO75152 810 aaKnown RBP eCLIP19.17■□□□□ 0.66
CAPN1-201ENST00000279247 ACO1P21399 889 aaKnown RBP19.17■□□□□ 0.66
CAPN1-201ENST00000279247 MMS22LQ6ZRQ5 1243 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 UBL4BQ8N7F7 174 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 IFT122Q9HBG6 1241 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 GPBP1L1Q9HC44 474 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-201ENST00000279247 CPSF3Q9UKF6 684 aaKnown RBP19.17■□□□□ 0.66
CAPN1-201ENST00000279247 GTF3C4Q9UKN8 822 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 POLIQ9UNA4 740 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 TCRBV7S2A1N4TA0A589 114 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 GOLGA6BA6NDN3 693 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 KIZQ2M2Z5 673 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 JPH2Q9BR39 696 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-201ENST00000279247 ACBD3Q9H3P7 528 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 DAPK3O43293 454 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 EPHB4P54760 987 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 CDH8P55286 799 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 PPFIA1Q13136 1202 aa19.17■□□□□ 0.66
CAPN1-201ENST00000279247 ZNF699Q32M78 642 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms