RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NUP98P52948 1817 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 COL14A1Q05707 1796 aaKnown RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 WASHC2DQ5SRD0 308 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 CROCCP2Q86T23 111 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 SATL1Q86VE3 508 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 MAML1Q92585 1016 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 USP6NLQ92738 828 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 CCDC124Q96CT7 223 aaKnown RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 ZNF184Q99676 751 aaPredicted RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 DMAP1Q9NPF5 467 aaPredicted RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 SLIT2O94813 1529 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 ZBTB39O15060 712 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 ZSCAN5DPP0CG00 497 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 FYB2Q5VWT5 728 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 TRMT10CQ7L0Y3 403 aaKnown RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 CLNKQ7Z7G1 428 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 THTPAQ9BU02 230 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 ROPN1BQ9BZX4 212 aaPredicted RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 BHMT2Q9H2M3 363 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 ROPN1Q9HAT0 212 aaPredicted RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 KRT82Q9NSB4 513 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
HERC6-202ENST00000273960 UTRNP46939 3433 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 KAT6AQ92794 2004 aa13.61□□□□□ -0.23
HERC6-202ENST00000273960 BTNL10A8MVZ5 291 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 ATP6V1B1P15313 513 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 RRM1P23921 792 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 TM4SF1P30408 202 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 ARSHQ5FYA8 562 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 HAS1Q92839 578 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 FAM84AQ96KN4 292 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 FNBP1Q96RU3 617 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 SPATA16Q9BXB7 569 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 COL1A1P02452 1464 aaPredicted RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 PPEF1O14829 653 aaPredicted RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 CDH16O75309 829 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 ATP5HO75947 161 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 IFNB1P01574 187 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 POLD1P28340 1107 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 CDK8P49336 464 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 MAPK6Q16659 721 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 PRR16Q569H4 304 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 ZNF653Q96CK0 615 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 BICD1Q96G01 975 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 NUP85Q9BW27 656 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 LRRC27Q9C0I9 530 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 SCAF8Q9UPN6 1271 aaKnown RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 DDX60Q8IY21 1712 aaKnown RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 ARHGAP42A6NI28 874 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 MEI4A8MW99 385 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 B2RBV5 119 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 GSC2O15499 205 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 ZSCAN9O15535 394 aaPredicted RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 TBCAO75347 108 aaKnown RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 GALK1P51570 392 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 TMEM63BQ5T3F8 832 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 SPATA24Q86W54 205 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 ARL10Q8N8L6 244 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
HERC6-202ENST00000273960 RBM15Q96T37 977 aaKnown RBP eCLIP13.6□□□□□ -0.23
HERC6-202ENST00000273960 ZNF287Q9HBT7 754 aa13.6□□□□□ -0.23
HERC6-202ENST00000273960 RNASEH1O60930 286 aaKnown RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 ETS1P14921 441 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 KRT4P19013 534 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 HOXD13P35453 343 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 C12orf60Q5U649 245 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 IZUMO3Q5VZ72 239 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 ENDOVQ8N8Q3 282 aaKnown RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 PYDC1Q8WXC3 89 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 PTPRN2Q92932 1015 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 TTC17Q96AE7 1141 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 HERPUD2Q9BSE4 406 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 EBF3Q9H4W6 596 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 ZWILCHQ9H900 591 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 MYOCOSA0A1B0GUC4 107 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
HERC6-202ENST00000273960 PDIA5Q14554 519 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 ACAP1Q15027 740 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 EFTUD2Q15029 972 aaKnown RBP eCLIP13.59□□□□□ -0.23
HERC6-202ENST00000273960 LPCAT4Q643R3 524 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 C10orf82Q8WW14 230 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 CEP95Q96GE4 821 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 PLEKHG4BQ96PX9 1271 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 ATXN10Q9UBB4 475 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 ZNF232Q9UNY5 417 aa13.59□□□□□ -0.23
HERC6-202ENST00000273960 CCDC195A0A1B0GUA6 201 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms