RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 C9orf131Q5VYM1 1079 aa14□□□□□ -0.17
SMG9-201ENST00000270066 TAS2R42Q7RTR8 314 aa14□□□□□ -0.17
SMG9-201ENST00000270066 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
SMG9-201ENST00000270066 ZBED8Q8IZ13 594 aa14□□□□□ -0.17
SMG9-201ENST00000270066 PPHLN1Q8NEY8 458 aaKnown RBP14□□□□□ -0.17
SMG9-201ENST00000270066 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
SMG9-201ENST00000270066 SUDS3Q9H7L9 328 aaPredicted RBP14□□□□□ -0.17
SMG9-201ENST00000270066 SENP2Q9HC62 589 aa14□□□□□ -0.17
SMG9-201ENST00000270066 GTSE1Q9NYZ3 720 aa14□□□□□ -0.17
SMG9-201ENST00000270066 H0Y3Z8 333 aa14□□□□□ -0.17
SMG9-201ENST00000270066 HLA-DRAP01903 254 aa14□□□□□ -0.17
SMG9-201ENST00000270066 PDGFRAP16234 1089 aa14□□□□□ -0.17
SMG9-201ENST00000270066 ZNF677Q86XU0 584 aa14□□□□□ -0.17
SMG9-201ENST00000270066 ATL2Q8NHH9 583 aa14□□□□□ -0.17
SMG9-201ENST00000270066 THOC1Q96FV9 657 aaKnown RBP14□□□□□ -0.17
SMG9-201ENST00000270066 PPP1R2P1Q96PQ5 205 aa14□□□□□ -0.17
SMG9-201ENST00000270066 TRIM33Q9UPN9 1127 aa14□□□□□ -0.17
SMG9-201ENST00000270066 SLIT1O75093 1534 aa14□□□□□ -0.17
SMG9-201ENST00000270066 PI4K2BG5E9Z4 385 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 ACTR2P61160 394 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 CACNB2Q08289 660 aaPredicted RBP13.99□□□□□ -0.17
SMG9-201ENST00000270066 SKIV2LQ15477 1246 aaKnown RBP13.99□□□□□ -0.17
SMG9-201ENST00000270066 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMG9-201ENST00000270066 ZNF484Q5JVG2 852 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 TRAPPC11Q7Z392 1133 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
SMG9-201ENST00000270066 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
SMG9-201ENST00000270066 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 UNC45AQ9H3U1 944 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 SARS2Q9NP81 518 aaKnown RBP13.99□□□□□ -0.17
SMG9-201ENST00000270066 TUBE1Q9UJT0 475 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 CFLARO15519 480 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 STK4Q13043 487 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 LRRC71Q8N4P6 559 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 ANGPTL2Q9UKU9 493 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 ARSEP51690 589 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 LAMB3Q13751 1172 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 OR6P1Q8NGX9 317 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 C1orf54Q8WWF1 131 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 GMCL1Q96IK5 515 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 TMEM60Q9H2L4 133 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 THEGQ9P2T0 379 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 PCDHB7Q9Y5E2 793 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 NWD1Q149M9 1564 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 EPHX2P34913 555 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 ST8SIA6P61647 398 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 CATSPER3Q86XQ3 398 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 NIF3L1Q9GZT8 377 aa13.99□□□□□ -0.17
SMG9-201ENST00000270066 UBE2Q2LH0YL09 131 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 PRRG1O14668 218 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 MSH4O15457 936 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 RPLP2P05387 115 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 CYP11B2P19099 503 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 KRT17Q04695 432 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 ZC2HC1CQ53FD0 456 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 RTFDC1Q9BY42 306 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 NPTXRO95502 500 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 FDPSP14324 419 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 RGS7P49802 495 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 TROAPQ12815 778 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 ZC3H18Q86VM9 953 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 CPA5Q8WXQ8 436 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 EGFL8Q99944 293 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 XAB2Q9HCS7 855 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 PDHA1P08559 390 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 IL1R1P14778 569 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 NOP14P78316 857 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 FMR1Q06787 632 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMG9-201ENST00000270066 HP1BP3Q5SSJ5 553 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 ANGPTL8Q6UXH0 198 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 RAB42Q8N4Z0 105 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 SLC35G2Q8TBE7 412 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 ANKRD7Q92527 254 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 VPS33BQ9H267 617 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 SCAF8Q9UPN6 1271 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 HPS5Q9UPZ3 1129 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 KIF20BQ96Q89 1820 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 A0A1W2PQJ5 194 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 F5H423 210 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 UPP2O95045 317 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 POU5F1BQ06416 359 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 HSP90AA5PQ58FG0 334 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 ATPAF2Q8N5M1 289 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 TSSK1BQ9BXA7 367 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 MRPL40Q9NQ50 206 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 NDFIP2Q9NV92 336 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 UBA6A0AVT1 1052 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 C3orf70A6NLC5 250 aaPredicted RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 TRPA1O75762 1119 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 FGFR2P21802 821 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 FBXW10Q5XX13 1052 aa13.98□□□□□ -0.17
SMG9-201ENST00000270066 PPARGC1AQ9UBK2 798 aaKnown RBP13.98□□□□□ -0.17
SMG9-201ENST00000270066 ADGRB1O14514 1584 aa13.97□□□□□ -0.17
SMG9-201ENST00000270066 A0A0G2JND7 137 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms