RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ERCC6LQ2NKX8 1250 aa12.42□□□□□ -0.42
SCAF11-201ENST00000266589 CATSPER4Q7RTX7 472 aa12.42□□□□□ -0.42
SCAF11-201ENST00000266589 CEP112Q8N8E3 955 aa12.42□□□□□ -0.42
SCAF11-201ENST00000266589 UPF3AQ9H1J1 476 aaKnown RBP12.42□□□□□ -0.42
SCAF11-201ENST00000266589 SPC25Q9HBM1 224 aa12.42□□□□□ -0.42
SCAF11-201ENST00000266589 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
SCAF11-201ENST00000266589 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
SCAF11-201ENST00000266589 A0A0A6YYK5 440 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 MEFVO15553 781 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 ELNP15502 786 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 ACO1P21399 889 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 HOXC8P31273 242 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 CDR2Q01850 454 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 IFI16Q16666 785 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 CTNNBL1Q8WYA6 563 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 UBXN4Q92575 508 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 PCDHB18PQ96TA0 734 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 MTG1Q9BT17 334 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 SNX12Q9UMY4 172 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 NCANO14594 1321 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 SCN10AQ9Y5Y9 1956 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 CITO14578 2027 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 NCK2O43639 380 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 TRPA1O75762 1119 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 FTCDO95954 541 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 CALCAP01258 141 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 EIF4BP23588 611 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 APLP1P51693 650 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 DCAF4L1Q3SXM0 396 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 JADE1Q6IE81 842 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 CXCL17Q6UXB2 119 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 DDX1Q92499 740 aaKnown RBP12.41□□□□□ -0.42
SCAF11-201ENST00000266589 CAPZA3Q96KX2 299 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 THAP2Q9H0W7 228 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 ISCUQ9H1K1 167 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 PCDHB4Q9Y5E5 795 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 RALGAPA2Q2PPJ7 1873 aa12.41□□□□□ -0.42
SCAF11-201ENST00000266589 RTN2O75298 545 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 NPTXRO95502 500 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-201ENST00000266589 KRT19P08727 400 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 GZMAP12544 262 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-201ENST00000266589 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-201ENST00000266589 SNX17Q15036 470 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 PCBP1Q15365 356 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCAF11-201ENST00000266589 ZNF699Q32M78 642 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 SLC10A6Q3KNW5 377 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 TEX35Q5T0J7 233 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 NOTUMQ6P988 496 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 SLC27A1Q6PCB7 646 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 TMEM270Q6UE05 265 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 APBB1IPQ7Z5R6 666 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-201ENST00000266589 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 CD99L2Q8TCZ2 262 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 TMEM40Q8WWA1 233 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 RFFLQ8WZ73 363 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 GOLGA1Q92805 767 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 ARHGEF26Q96DR7 871 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 ACAP3Q96P50 834 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 TLR10Q9BXR5 811 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 CFHR5Q9BXR6 569 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 NIF3L1Q9GZT8 377 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 ASB7Q9H672 318 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 XPNPEP3Q9NQH7 507 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 HYOU1Q9Y4L1 999 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 MROH7Q68CQ1 1323 aa12.4□□□□□ -0.42
SCAF11-201ENST00000266589 PCNTO95613 3336 aa12.4□□□□□ -0.43
SCAF11-201ENST00000266589 ZNF185O15231 689 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 ADAMTS4O75173 837 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 GRM5P41594 1212 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 BPIFB4P59827 614 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 C1orf127Q8N9H9 656 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 RBBP8NLQ8NC74 664 aaPredicted RBP12.39□□□□□ -0.43
SCAF11-201ENST00000266589 TPCN2Q8NHX9 752 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 PSMB7Q99436 277 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 CCDC94Q9BW85 323 aaPredicted RBP12.39□□□□□ -0.43
SCAF11-201ENST00000266589 SIX4Q9UIU6 781 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 TSKSQ9UJT2 592 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 THSD7BQ9C0I4 1608 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
SCAF11-201ENST00000266589 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 PRLRP16471 622 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 TCP1P17987 556 aaKnown RBP12.39□□□□□ -0.43
SCAF11-201ENST00000266589 NKX3-2P78367 333 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 TMEM132DQ14C87 1099 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 MEI1Q5TIA1 1274 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
SCAF11-201ENST00000266589 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
SCAF11-201ENST00000266589 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms