RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 NAB2Q15742 525 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 PTGISQ16647 500 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 SGSM1Q2NKQ1 1148 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 JADE1Q6IE81 842 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 SPOPLQ6IQ16 392 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 EIF2AQ9BY44 585 aaKnown RBP26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 PLEKHA5Q9HAU0 1116 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 C2CD2Q9Y426 696 aa26.3■■□□□ 1.8
R3HCC1-201ENST00000265806 CITO14578 2027 aa26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 CUL2Q13617 745 aa26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 ALKBH5Q6P6C2 394 aaKnown RBP26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 FAM228AQ86W67 206 aa26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 GLT1D1Q96MS3 346 aa26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 SENP6Q9GZR1 1112 aaPredicted RBP26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 TSKSQ9UJT2 592 aa26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 NUB1Q9Y5A7 615 aa26.29■■□□□ 1.8
R3HCC1-201ENST00000265806 USP8P40818 1118 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 MGAT3Q09327 533 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 TRPC3Q13507 836 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 ZNF569Q5MCW4 686 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 SMYD5Q6GMV2 418 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 LNX1Q8TBB1 728 aaPredicted RBP26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 NOC2LQ9Y3T9 749 aaKnown RBP26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 FRMPD3Q5JV73 1810 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 CYP26A1O43174 497 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 MYL6P60660 151 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 SCARA3Q6AZY7 606 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 EPS8L1Q8TE68 723 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 ARID3AQ99856 593 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 AGPAT1Q99943 283 aa26.28■■□□□ 1.8
R3HCC1-201ENST00000265806 CHRNA1P02708 482 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 CASQ1P31415 396 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 PTK7Q13308 1070 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 TMEM132DQ14C87 1099 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 C1orf127Q8N9H9 656 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 ARRDC4Q8NCT1 418 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 DHX38Q92620 1227 aaKnown RBP26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 TAF4BQ92750 862 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 TRIM6Q9C030 488 aaPredicted RBP26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 XYLT2Q9H1B5 865 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 DERAQ9Y315 318 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 DUSP10Q9Y6W6 482 aa26.27■■□□□ 1.8
R3HCC1-201ENST00000265806 TNFAIP3P21580 790 aa26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 UBXN11Q5T124 520 aa26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 GLYCTKQ8IVS8 523 aa26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 SNTG2Q9NY99 539 aa26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 SIX4Q9UIU6 781 aa26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 NOCTQ9UK39 431 aaKnown RBP26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 RALGAPA2Q2PPJ7 1873 aa26.26■■□□□ 1.79
R3HCC1-201ENST00000265806 SGPL1O95470 568 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 ACO1P21399 889 aaKnown RBP26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 SLC35F6Q8N357 371 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 CXorf38Q8TB03 319 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 FAXDC2Q96IV6 333 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 SNX27Q96L92 541 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 INTUQ9ULD6 942 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 CNTN6Q9UQ52 1028 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 YARSP54577 528 aaKnown RBP26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 SLC47A2Q86VL8 602 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 SLC20A1Q8WUM9 679 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 SECISBP2LQ93073 1101 aaKnown RBP26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 NIF3L1Q9GZT8 377 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 NXF3Q9H4D5 531 aaKnown RBP26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 PTPN22Q9Y2R2 807 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 UMODL1Q5DID0 1318 aa26.25■■□□□ 1.79
R3HCC1-201ENST00000265806 RPS6KA5O75582 802 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 CTSHP09668 335 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 KRT5P13647 590 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 CYP11B1P15538 503 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 ZNF699Q32M78 642 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 NOP9Q86U38 636 aaKnown RBP26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 SLC43A3Q8NBI5 491 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 SH3TC2Q8TF17 1288 aa26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 U2AF1L4Q8WU68 220 aaKnown RBP26.24■■□□□ 1.79
R3HCC1-201ENST00000265806 A0A1W2PQ45 241 aaPredicted RBP26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 A0A1W2PQY0 241 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 BTNL10A8MVZ5 291 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 THPOP40225 353 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 PDE6CP51160 858 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 TERF1P54274 439 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 BPIFB4P59827 614 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 TRIM71Q2Q1W2 868 aaKnown RBP26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 ALKAL1Q6UXT8 129 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 RNF10Q8N5U6 811 aaKnown RBP26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 UBR7Q8N806 425 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 PACSIN1Q9BY11 444 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 VRTNQ9H8Y1 702 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 TRMT13Q9NUP7 481 aaKnown RBP26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 ITGA11Q9UKX5 1188 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 ST3GAL5Q9UNP4 418 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 MACROD2A1Z1Q3 448 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 ATICP31939 592 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 RPUSD2Q8IZ73 545 aaKnown RBP26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 KIF12Q96FN5 646 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 CHST12Q9NRB3 414 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 WBP1LQ9NX94 342 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 CNTN3Q9P232 1028 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 PHF24Q9UPV7 400 aa26.23■■□□□ 1.79
R3HCC1-201ENST00000265806 NOD1Q9Y239 953 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms