RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 CIDEBQ9UHD4 219 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 COG5Q9UP83 839 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 BUD23O43709 281 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 VCAM1P19320 739 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 NFKBIAP25963 317 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 TECP42680 631 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 GALCP54803 685 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 DSG1Q02413 1049 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 TRIP13Q15645 432 aaPredicted RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 SLC1A5Q15758 541 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 TMTC3Q6ZXV5 915 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 KCNK18Q7Z418 384 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 PPFIBP2Q8ND30 876 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 LNX1Q8TBB1 728 aaPredicted RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 SLC35G2Q8TBE7 412 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 SYN2Q92777 582 aaPredicted RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 ART4Q93070 314 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 MASTLQ96GX5 879 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 BTBD10Q9BSF8 475 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 STK33Q9BYT3 514 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 METTL14Q9HCE5 456 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 BLOC1S4Q9NUP1 217 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 TAS2R14Q9NYV8 317 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 NENFQ9UMX5 172 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 R3HDM2Q9Y2K5 976 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 NHSQ6T4R5 1651 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 CLRN2A0PK11 232 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 HTR3EA5X5Y0 456 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 SPTLC1O15269 473 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 CYP4A11Q02928 519 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 SMUG1Q53HV7 270 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 CATIPQ7Z7H3 387 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 CATSPER2Q96P56 530 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 CCSER1Q9C0I3 900 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 NACA2Q9H009 215 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 CNNM2Q9H8M5 875 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 LIN28AQ9H9Z2 209 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 ARHGEF4Q9NR80 690 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 KIAA1522Q9P206 1035 aaPredicted RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 ARMCX1Q9P291 453 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 AMFRQ9UKV5 643 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 TNRC6CQ9HCJ0 1690 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 COL5A3P25940 1745 aaPredicted RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 RTL9Q8NET4 1388 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 SBF2Q86WG5 1849 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 WDR91A4D1P6 747 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 TRAF5O00463 557 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 EDF1O60869 148 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 SORBS2O94875 1100 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 ALDH2P05091 517 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 ALX1Q15699 326 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 ANKDD1AQ495B1 522 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 MDH1BQ5I0G3 518 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 NANOGNBQ7Z5D8 188 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 C4orf33Q8N1A6 199 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 USP6NLQ92738 828 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 PANX3Q96QZ0 392 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 SMC6Q96SB8 1091 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 PYM1Q9BRP8 204 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 LUC7LQ9NQ29 371 aaKnown RBP9.3□□□□□ -0.92
VAPB-201ENST00000265619 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
VAPB-201ENST00000265619 PIAS1O75925 651 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 GSTT2P0CG29 244 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 GSTT2BP0CG30 244 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 SCG2P13521 617 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 RPA3P35244 121 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 HIRAP54198 1017 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 AQP4P55087 323 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 NCOA4Q13772 614 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 GK3PQ14409 553 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 MAPK6Q16659 721 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 CCDC137Q6PK04 289 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 SLC2A7Q6PXP3 512 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 NME8Q8N427 588 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 MRRFQ96E11 262 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 TCP11L1Q9NUJ3 509 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 ZNF212Q9UDV6 495 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 A0A1B0GTW7 788 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 CCDC160A6NGH7 325 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 GYG2O15488 501 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 ATP9BO43861 1147 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 TFAP2AP05549 437 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 LDHCP07864 332 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 HALP42357 657 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 MAP7Q14244 749 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 TMED2Q15363 201 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 CNNM4Q6P4Q7 775 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 NLRX1Q86UT6 975 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 RAVER1Q8IY67 606 aaKnown RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 ST13P4Q8IZP2 240 aaPredicted RBP9.29□□□□□ -0.92
VAPB-201ENST00000265619 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 ZFP28Q8NHY6 868 aa9.29□□□□□ -0.92
VAPB-201ENST00000265619 C7orf43Q8WVR3 580 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms