RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 hCG_2014768A0A024R1R8 64 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
NUP54-201ENST00000264883 ASLP04424 464 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 ABCB4P21439 1286 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 NEK3P51956 506 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
NUP54-201ENST00000264883 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 UBE2SQ16763 222 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 DAB2IPQ5VWQ8 1189 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 CCDC105Q8IYK2 499 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 C10orf82Q8WW14 230 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 SLC35C1Q96A29 364 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
NUP54-201ENST00000264883 MKNK1Q9BUB5 465 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 STK33Q9BYT3 514 aa13.94□□□□□ -0.18
NUP54-201ENST00000264883 IGSF9BQ9UPX0 1349 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 CCDC22O60826 627 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 NR3C1P04150 777 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 GAP43P17677 238 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 SOX5P35711 763 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 MARK2Q7KZI7 788 aaKnown RBP13.93□□□□□ -0.18
NUP54-201ENST00000264883 RHOT2Q8IXI1 618 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 ANKRD35Q8N283 1001 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 NAT14Q8WUY8 206 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 DYDC2Q96IM9 177 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 BTBD10Q9BSF8 475 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 PHACTR1Q9C0D0 580 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 SLCO1B3Q9NPD5 702 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 UMODL1Q5DID0 1318 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 EIF3DO15371 548 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUP54-201ENST00000264883 EXOC3O60645 756 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 ITGA2BP08514 1039 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 RPA1P27694 616 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 RHBDL3P58872 404 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 CTTNQ14247 550 aaKnown RBP13.93□□□□□ -0.18
NUP54-201ENST00000264883 TCEAL1Q15170 157 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 SLC45A4Q5BKX6 768 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 DCAF17Q5H9S7 520 aaPredicted RBP13.93□□□□□ -0.18
NUP54-201ENST00000264883 ST13P4Q8IZP2 240 aaPredicted RBP13.93□□□□□ -0.18
NUP54-201ENST00000264883 LNX1Q8TBB1 728 aaPredicted RBP13.93□□□□□ -0.18
NUP54-201ENST00000264883 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
NUP54-201ENST00000264883 ZHX3Q9H4I2 956 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 AAASQ9NRG9 546 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 CHMP2BQ9UQN3 213 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 NAALADL1Q9UQQ1 740 aa13.93□□□□□ -0.18
NUP54-201ENST00000264883 UBE4BO95155 1302 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 NPHP3-ACAD11A0A0J9YXS1 232 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 GSC2O15499 205 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 AKAP3O75969 853 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 TTC4O95801 387 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 GABPAQ06546 454 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 R3HDM1Q15032 1099 aaKnown RBP13.92□□□□□ -0.18
NUP54-201ENST00000264883 MFSD14BQ5SR56 506 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 TCERG1LQ5VWI1 586 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 SPATA24Q86W54 205 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 SFR1Q86XK3 245 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 NME8Q8N427 588 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 OLFML3Q9NRN5 406 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 HSFX1Q9UBD0 423 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 ACTL7BQ9Y614 415 aa13.92□□□□□ -0.18
NUP54-201ENST00000264883 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 RIMBP2O15034 1052 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 EDF1O60869 148 aaKnown RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 MED24O75448 989 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 TCEA3O75764 348 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 ASMTLO95671 621 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 OATP04181 439 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 CETPP11597 493 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 PABPC4Q13310 644 aaKnown RBP eCLIP13.91□□□□□ -0.18
NUP54-201ENST00000264883 KYNUQ16719 465 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 C11orf63Q6NUN7 778 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 NLRP9Q7RTR0 991 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 ZDHHC14Q8IZN3 488 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 MCUR1Q96AQ8 359 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 AJAP1Q9UKB5 411 aaPredicted RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 TBC1D30Q9Y2I9 924 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 ASTN1O14525 1302 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 ANKRD62A6NC57 917 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 A6NJR5 290 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 THAP12O43422 761 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 CDH16O75309 829 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 ZWINTO95229 277 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 VAV1P15498 845 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 CHKAP35790 457 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
NUP54-201ENST00000264883 PHLDB3Q6NSJ2 640 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 CLNKQ7Z7G1 428 aa13.91□□□□□ -0.18
NUP54-201ENST00000264883 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms