RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SYCP2LQ5T4T6 812 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 SHC3Q92529 594 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 KLF6Q99612 283 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 MYLK2Q9H1R3 596 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 C10orf88Q9H8K7 445 aa13.18□□□□□ -0.3
CHMP3-201ENST00000263856 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-201ENST00000263856 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 PIK3CDO00329 1044 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 C21orf2O43822 256 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 MMP14P50281 582 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 TAF11Q15544 211 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 NFIL3Q16649 462 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 PODNQ7Z5L7 613 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-201ENST00000263856 DCTN4Q9UJW0 460 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 FOCADQ5VW36 1801 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 CDH16O75309 829 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
CHMP3-201ENST00000263856 ADSSP30520 456 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 TAS2R40P59535 323 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 BNIP1Q12981 228 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-201ENST00000263856 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 CGB2Q6NT52 195 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 C12orf65Q9H3J6 166 aaKnown RBP13.17□□□□□ -0.3
CHMP3-201ENST00000263856 RXFP1Q9HBX9 757 aa13.17□□□□□ -0.3
CHMP3-201ENST00000263856 RAVER2Q9HCJ3 691 aaKnown RBP13.17□□□□□ -0.3
CHMP3-201ENST00000263856 FSCN2O14926 492 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 TP73O15350 636 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 CBX6O95503 412 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 PDHA1P08559 390 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 MMP10P09238 476 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 NPR1P16066 1061 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ADRA2BP18089 450 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 MAGEA4P43358 317 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ACOT2P49753 483 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 HADHBP55084 474 aaKnown RBP13.16□□□□□ -0.3
CHMP3-201ENST00000263856 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
CHMP3-201ENST00000263856 SPP2Q13103 211 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 DACT2Q5SW24 774 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 OSBPL8Q9BZF1 889 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-201ENST00000263856 MROH7Q68CQ1 1323 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 OVGP1Q12889 678 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ZBED8Q8IZ13 594 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 IDI2Q9BXS1 227 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 CCDC134Q9H6E4 229 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 KCND2Q9NZV8 630 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 RAD17O75943 681 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 GPS1Q13098 491 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
CHMP3-201ENST00000263856 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 GBP7Q8N8V2 638 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-201ENST00000263856 LRRC8CQ8TDW0 803 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 CEP170P1Q96L14 293 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 TMEM109Q9BVC6 243 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 ADAM22Q9P0K1 906 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 TBX20Q9UMR3 447 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 PCDHB4Q9Y5E5 795 aa13.16□□□□□ -0.3
CHMP3-201ENST00000263856 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 FAM47DPA6NHR8 397 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 ATP9AO75110 1047 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 TAC1P20366 129 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 NPTX2P47972 431 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 PTK6Q13882 451 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
CHMP3-201ENST00000263856 PCNX4Q63HM2 1172 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 MAGEB18Q96M61 343 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
CHMP3-201ENST00000263856 TCF4P15884 667 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 CHRNA5P30532 468 aa13.15□□□□□ -0.3
CHMP3-201ENST00000263856 PCK1P35558 622 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms