RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CFAP57Q96MR6 1250 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 TRABDQ9H4I3 376 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 ETS1P14921 441 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 TNFRSF8P28908 595 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 ATL2Q8NHH9 583 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 DTX3LQ8TDB6 740 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 TMEM237Q96Q45 408 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 MRPL47Q9HD33 250 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 ENTPD3O75355 529 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 ITGB5P18084 799 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 TKFCQ3LXA3 575 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 HIPK4Q8NE63 616 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 LRRC37BQ96QE4 947 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 YIPF3Q9GZM5 350 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 AGO2Q9UKV8 859 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 HEY1Q9Y5J3 304 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 LRP6O75581 1613 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 DRD4P21917 467 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 PSMA2P25787 234 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 ZRSR2Q15696 482 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 DUPD1Q68J44 220 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 CYTH2Q99418 400 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 NOP53Q9NZM5 478 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 A0A0A6YYK5 440 aaPredicted RBP17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 BANF1O75531 89 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 GRAP2O75791 330 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 PSMD10O75832 226 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 FSBPO95073 299 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 RARGP13631 454 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 BPIFB4P59827 614 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 CCDC62Q6P9F0 684 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 RHOT1Q8IXI2 618 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 GPD1LQ8N335 351 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 FAM151AQ8WW52 585 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 ZBTB45Q96K62 511 aaPredicted RBP17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 MARCOQ9UEW3 520 aaPredicted RBP17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 GTF3C4Q9UKN8 822 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 TBX20Q9UMR3 447 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 CHD4Q14839 1912 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 DDX3YO15523 660 aaKnown RBP17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 MAGEA4P43358 317 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 SPRED3Q2MJR0 410 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 SEMA4DQ92854 862 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 HAO1Q9UJM8 370 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 NEU2Q9Y3R4 380 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 CPA2P48052 419 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 DRP2Q13474 957 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 SPARCL1Q14515 664 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 CD302Q8IX05 232 aa17.16■□□□□ 0.34
PDZRN3-201ENST00000263666 ATP9AO75110 1047 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 INHBAP08476 426 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 CDR2Q01850 454 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 KIF9Q9HAQ2 790 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 FEM1BQ9UK73 627 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 G3BP2Q9UN86 482 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 PCDHA10Q9Y5I2 948 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 BRD2P25440 801 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 IREB2P48200 963 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 HMGCS2P54868 508 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 AUHQ13825 339 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 PPP6R3Q5H9R7 873 aaPredicted RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 KCTD6Q8NC69 237 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 LENG9Q96B70 501 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 ATG4CQ96DT6 458 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 PDGFDQ9GZP0 370 aaPredicted RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 DEFB129Q9H1M3 183 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 RPAP3Q9H6T3 665 aaPredicted RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 A8MUI8 341 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 UPP2O95045 317 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 MT-ND3P03897 115 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 UGCGQ16739 394 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 CFAP61Q8NHU2 1237 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 TRAIPQ9BWF2 469 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 SLC13A1Q9BZW2 595 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 ARL2BPQ9Y2Y0 163 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 TTLL3Q9Y4R7 772 aa17.15■□□□□ 0.34
PDZRN3-201ENST00000263666 GTPBP10A4D1E9 387 aaKnown RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 TGFB2P61812 414 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 KRT81Q14533 505 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 HYIQ5T013 277 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 ERMARDQ5T6L9 678 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 DARS2Q6PI48 645 aaKnown RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 MOXD1Q6UVY6 613 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 RBBP8NLQ8NC74 664 aaPredicted RBP17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 GMCL1Q96IK5 515 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 UBN1Q9NPG3 1134 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 TBC1D22BQ9NU19 505 aa17.14■□□□□ 0.33
PDZRN3-201ENST00000263666 NAALADL1Q9UQQ1 740 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms