RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SLC30A10Q6XR72 485 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 FITM2Q8N6M3 262 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 SKA1Q96BD8 255 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 TUBGCP5Q96RT8 1024 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 DCUN1D5Q9BTE7 237 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 TIPINQ9BVW5 301 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 DHX36Q9H2U1 1008 aaKnown RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 ZC4H2Q9NQZ6 224 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 IL1RAPL1Q9NZN1 696 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 DDX60Q8IY21 1712 aaKnown RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 TRIM49BA6NDI0 452 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 MATN2O00339 956 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 XPO1O14980 1071 aaKnown RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 TTI1O43156 1089 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 OXSR1O95747 527 aaPredicted RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 FGFR4P22455 802 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 STIP1P31948 543 aaKnown RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 ARFIP2P53365 341 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 STRN3Q13033 797 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 CRY2Q49AN0 593 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 PDXDC1Q6P996 788 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 FBXO11Q86XK2 927 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 CD302Q8IX05 232 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 CAPSLQ8WWF8 208 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 GJA10Q969M2 543 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 CELF4Q9BZC1 486 aaKnown RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 CSRNP2Q9H175 543 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 ISCUQ9H1K1 167 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 SMYD3Q9H7B4 428 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 GID8Q9NWU2 228 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 RREB1Q92766 1687 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 RTL9Q8NET4 1388 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 CBFA2T3O75081 653 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 PLEKP08567 350 aaPredicted RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 STK4Q13043 487 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 PPP2R5CQ13362 524 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 WASHC2DQ5SRD0 308 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 IFNLR1Q8IU57 520 aaPredicted RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 SYT2Q8N9I0 419 aaPredicted RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 FLCNQ8NFG4 579 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 CALML6Q8TD86 181 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 SLC26A7Q8TE54 656 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 TRIM51Q9BSJ1 452 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 PSTPIP2Q9H939 334 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.85□□□□□ -0.99
LDB3-201ENST00000263066 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 RNF225M0QZC1 329 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 BNIP1Q12981 228 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 LSAMPQ13449 338 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 SLC29A2Q14542 456 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TRIM16LQ309B1 348 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 RABGAP1LQ5R372 815 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 OR52E8Q6IFG1 317 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 APOBEC3HQ6NTF7 200 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 CCDC105Q8IYK2 499 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 FAM186BQ8IYM0 893 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.84□□□□□ -0.99
LDB3-201ENST00000263066 DACT3Q96B18 629 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 CCDC124Q96CT7 223 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 ZNF274Q96GC6 653 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 PBKQ96KB5 322 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 FERMT1Q9BQL6 677 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 POLR3CQ9BUI4 534 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 DENND2DQ9H6A0 471 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 LIMA1Q9UHB6 759 aaKnown RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 PTPN22Q9Y2R2 807 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 SPO11Q9Y5K1 396 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TACC3Q9Y6A5 838 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 AP3B1O00203 1094 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 PEX11AO75192 247 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 BMP6P22004 513 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 GUCY1A2P33402 732 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 KRT2P35908 639 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 CDK7P50613 346 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
LDB3-201ENST00000263066 DNAJC3Q13217 504 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TJAP1Q5JTD0 557 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TREML1Q86YW5 311 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 ICA1LQ8NDH6 482 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 CHURC1Q8WUH1 139 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 OMA1Q96E52 524 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 ZNF333Q96JL9 665 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 KIAA1683Q9H0B3 1180 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 MYLK2Q9H1R3 596 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TMEM60Q9H2L4 133 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 AS3MTQ9HBK9 375 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 KCPQ6ZWJ8 1503 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 C5orf60A6NFR6 353 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 TMEM221A6NGB7 291 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 RSPH10B2B2RC85 870 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 PDLIM1O00151 329 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 STRNO43815 780 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 OR6B1O95007 311 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 RSPH10BP0C881 870 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 SMARCA1P28370 1054 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 STAT2P52630 851 aa8.84□□□□□ -0.99
LDB3-201ENST00000263066 ESRRGP62508 458 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms