RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 FAM26DQ5JW98 314 aa14□□□□□ -0.17
VAMP7-201ENST00000262640 UBXN11Q5T124 520 aa14□□□□□ -0.17
VAMP7-201ENST00000262640 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
VAMP7-201ENST00000262640 TAF4BQ92750 862 aa14□□□□□ -0.17
VAMP7-201ENST00000262640 SNX27Q96L92 541 aa14□□□□□ -0.17
VAMP7-201ENST00000262640 CHST12Q9NRB3 414 aa14□□□□□ -0.17
VAMP7-201ENST00000262640 GPR182O15218 404 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 USP8P40818 1118 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ARHGAP25P42331 645 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ETF1P62495 437 aaKnown RBP13.99□□□□□ -0.17
VAMP7-201ENST00000262640 CUL2Q13617 745 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 BMS1Q14692 1282 aaKnown RBP13.99□□□□□ -0.17
VAMP7-201ENST00000262640 SMYD5Q6GMV2 418 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 SPOPLQ6IQ16 392 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 TSGA10Q9BZW7 698 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 APOBEC3GQ9HC16 384 aaKnown RBP13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ADAMTS1Q9UHI8 967 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ST3GAL5Q9UNP4 418 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 PCNTO95613 3336 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 A0A087X0T9 212 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 A0A0U1RQJ8 604 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ARVCFO00192 962 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 CLSTN1O94985 981 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 CST3P01034 146 aaPredicted RBP13.99□□□□□ -0.17
VAMP7-201ENST00000262640 FAM228BP0C875 321 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 MAGEA1P43355 309 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 MYL6P60660 151 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 C10orf76Q5T2E6 689 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ATRIPQ8WXE1 791 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 ELMO3Q96BJ8 720 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 SYT11Q9BT88 431 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 NXF3Q9H4D5 531 aaKnown RBP13.99□□□□□ -0.17
VAMP7-201ENST00000262640 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
VAMP7-201ENST00000262640 KRT86O43790 486 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 KIF5CO60282 957 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 CCL5P13501 91 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 KIF5AQ12840 1032 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 FBXO47Q5MNV8 452 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 TWF2Q6IBS0 349 aaKnown RBP13.98□□□□□ -0.17
VAMP7-201ENST00000262640 C1orf127Q8N9H9 656 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 TSPAN18Q96SJ8 248 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 ITGA11Q9UKX5 1188 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 ANK1P16157 1881 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 RECQL4O94761 1208 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 MTFR1Q15390 333 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 ZNF699Q32M78 642 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 CCDC122Q5T0U0 273 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 TRPV6Q9H1D0 765 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 CNTN3Q9P232 1028 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 SIX4Q9UIU6 781 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 SQORQ9Y6N5 450 aa13.98□□□□□ -0.17
VAMP7-201ENST00000262640 PJA2O43164 708 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 CYP26A1O43174 497 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 KRT5P13647 590 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 ATICP31939 592 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 NFX1Q12986 1120 aaKnown RBP13.97□□□□□ -0.17
VAMP7-201ENST00000262640 ALKAL1Q6UXT8 129 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 USP38Q8NB14 1042 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 FAXDC2Q96IV6 333 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 ARID3AQ99856 593 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 AGPAT1Q99943 283 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 XYLT2Q9H1B5 865 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 ERVK-5Q9HDB9 667 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 DPP3Q9NY33 737 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 MYO1AQ9UBC5 1043 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 NENFQ9UMX5 172 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 HES2Q9Y543 173 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 IPPQ9Y573 584 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 RCCD1A6NED2 376 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 DDX3XO00571 662 aaKnown RBP eCLIP13.97□□□□□ -0.176e-12■■■■■ 45.7
VAMP7-201ENST00000262640 ITGB3P05106 788 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 KRT19P08727 400 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 TNFAIP3P21580 790 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 GNG11P61952 73 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 PAK2Q13177 524 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 NAB2Q15742 525 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 SYT10Q6XYQ8 523 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 HACE1Q8IYU2 909 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
VAMP7-201ENST00000262640 KIF18AQ8NI77 898 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 SLC30A5Q8TAD4 765 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 APOL6Q9BWW8 343 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
VAMP7-201ENST00000262640 R3HCC1Q9Y3T6 440 aaKnown RBP13.97□□□□□ -0.17
VAMP7-201ENST00000262640 ATP8B3O60423 1300 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 CENPFP49454 3210 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 SGPL1O95470 568 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.17
VAMP7-201ENST00000262640 PDE6CP51160 858 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 BPIFB4P59827 614 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 RBP5P82980 135 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 LPIN1Q14693 890 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 ZNF618Q5T7W0 954 aa13.96□□□□□ -0.17
VAMP7-201ENST00000262640 SCARA3Q6AZY7 606 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms