RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ITIH2P19823 946 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 SSTR1P30872 391 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 GCLCP48506 637 aaPredicted RBP16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 POU5F2Q8N7G0 328 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 CCDC89Q8N998 374 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 MPP4Q96JB8 637 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 ANLNQ9NQW6 1124 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 TMOD2Q9NZR1 351 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 ANKFY1Q9P2R3 1169 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 E2F8A0AVK6 867 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 UFL1O94874 794 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 MYL2P10916 166 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 SMC1BQ8NDV3 1235 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 WNT8AQ9H1J5 351 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 STXBP5LQ9Y2K9 1186 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 F5H423 210 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 PSMG1O95456 288 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 FAM200BP0CF97 657 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 AMPD1P23109 780 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 TRIP10Q15642 601 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 ZNF75CPQ92670 426 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 MTBPQ96DY7 904 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 PRR11Q96HE9 360 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 NSL1Q96IY1 281 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 LRMDAQ9H2I8 198 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 ETNK2Q9NVF9 386 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 USP46P62068 366 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 ACAP1Q15027 740 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 EFTUD2Q15029 972 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 CLUL1Q15846 466 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 GALNTL6Q49A17 601 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 SDCCAG8Q86SQ7 713 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 LCA5Q86VQ0 697 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 PPP1R36Q96LQ0 422 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 ZNF184Q99676 751 aaPredicted RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 CADM1Q9BY67 442 aaKnown RBP16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
PRPF40B-201ENST00000261897 GAS7O60861 476 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 STAT4Q14765 748 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 MMEL1Q495T6 779 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 TMEM119Q4V9L6 283 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ZNF394Q53GI3 561 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 RNF43Q68DV7 783 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 DCUN1D2Q6PH85 259 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ZBTB46Q86UZ6 589 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ARID3BQ8IVW6 561 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ART4Q93070 314 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 FAF1Q9UNN5 650 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 TRAF3IP3Q9Y228 551 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 N4BP2Q86UW6 1770 aaPredicted RBP16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 M0R2N6 131 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 POU5F1Q01860 360 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 BSPRYQ5W0U4 402 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 CGB2Q6NT52 195 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 C4orf50Q6ZRC1 276 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 RHPN2Q8IUC4 686 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 MAP7D3Q8IWC1 876 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 CCDC110Q8TBZ0 833 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 TUBGCP5Q96RT8 1024 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 TMEM120AQ9BXJ8 343 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 MYH1P12882 1939 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 TOM1L1O75674 476 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 PDE5AO76074 875 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 BGNP21810 368 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 NSFP46459 744 aaKnown RBP16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 GTF2IP78347 998 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ASPHQ12797 758 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 ATP13A4Q4VNC1 1196 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 RINT1Q6NUQ1 792 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 IYDQ6PHW0 289 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
PRPF40B-201ENST00000261897 A0A0A6YYK5 440 aaPredicted RBP16.83■□□□□ 0.29
PRPF40B-201ENST00000261897 SUPT3HO75486 399 aa16.83■□□□□ 0.29
PRPF40B-201ENST00000261897 ATL2Q8NHH9 583 aa16.83■□□□□ 0.29
PRPF40B-201ENST00000261897 TCP10LQ8TDR4 215 aa16.83■□□□□ 0.29
PRPF40B-201ENST00000261897 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.29
PRPF40B-201ENST00000261897 SAE1Q9UBE0 346 aaPredicted RBP16.83■□□□□ 0.29
PRPF40B-201ENST00000261897 LPXNO60711 386 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 DKC1O60832 514 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 ATP6V1G1O75348 118 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 SETSIPP0DME0 302 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 ACADSP16219 412 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 DESP17661 470 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 NCF2P19878 526 aaPredicted RBP16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 PRKCIP41743 596 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 MED21Q13503 144 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 CLNKQ7Z7G1 428 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 SLFN11Q7Z7L1 901 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 ZNF333Q96JL9 665 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 ACAP3Q96P50 834 aa16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 EIF2AK1Q9BQI3 630 aaKnown RBP16.83■□□□□ 0.28
PRPF40B-201ENST00000261897 KIAA1586Q9HCI6 787 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms