RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 FBXO32Q969P5 355 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 OGFRQ9NZT2 677 aa14.33□□□□□ -0.12
PDGFRB-201ENST00000261799 COPS2P61201 443 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 FKBP1BP68106 108 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 PID1Q7Z2X4 250 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 SLC35F6Q8N357 371 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 DACT3Q96B18 629 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 L3MBTL3Q96JM7 780 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 HEMGNQ9BXL5 484 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 FAM129AQ9BZQ8 928 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 SAYSD1Q9NPB0 183 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 C3orf70A6NLC5 250 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 F5H5T6 163 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 DNAJB2P25686 324 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 UNC45AQ9H3U1 944 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 PODXLO00592 558 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 CAV1Q03135 178 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 TWF1Q12792 350 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 RCN2Q14257 317 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 CAPRIN1Q14444 709 aaKnown RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 HPDLQ96IR7 371 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 NFKBIZQ9BYH8 718 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 PREX1Q8TCU6 1659 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 PRR23AA6NEV1 266 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 ADORA2AP29274 412 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 ATP2C1P98194 919 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 EFHD1Q9BUP0 239 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 MAN1C1Q9NR34 630 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 CKMP06732 381 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 OCM2P0CE71 109 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 OCMP0CE72 109 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 SNRNP35Q16560 246 aaKnown RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 KLHL38Q2WGJ6 581 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 NT5DC4Q86YG4 428 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 CFAP61Q8NHU2 1237 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 PABPC5Q96DU9 382 aaKnown RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 GTSE1Q9NYZ3 720 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 AKAP7Q9P0M2 348 aaPredicted RBP14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 ATP8A1Q9Y2Q0 1164 aa14.32□□□□□ -0.12
PDGFRB-201ENST00000261799 ENC1O14682 589 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 TRIM49P0CI25 452 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 TRIM49CP0CI26 452 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 PANX2Q96RD6 677 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 SPDYE5A6NIY4 337 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 THP07101 528 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 SPDYE7PQ495Y7 208 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 DDX27Q96GQ7 796 aaKnown RBP14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 EPB41L5Q9HCM4 733 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 CHST12Q9NRB3 414 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 MAP10Q9P2G4 905 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 LARGE1O95461 756 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 ZNF286BP0CG31 522 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 VCPP55072 806 aaKnown RBP14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 SLC26A7Q8TE54 656 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 SCUBE2Q9NQ36 999 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 BAG2O95816 211 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 POU5F1BQ06416 359 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 FSCN1Q16658 493 aaKnown RBP14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 NFRKBQ6P4R8 1299 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 CARNMT1Q8N4J0 409 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 PXMP2Q9NR77 195 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 NCKAP1Q9Y2A7 1128 aa14.31□□□□□ -0.12
PDGFRB-201ENST00000261799 DDHD2O94830 711 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 PRCPP42785 496 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 C11orf57Q6ZUT1 292 aaPredicted RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 C17orf75Q9HAS0 396 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 STK38LQ9Y2H1 464 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 NCF2P19878 526 aaPredicted RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 C2orf54Q08AI8 447 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 DGKZQ13574 1117 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 PDIA6Q15084 440 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 LRRC37BQ96QE4 947 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 LGALS16A8MUM7 142 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 GOLGA8MH3BSY2 632 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 NDUFA10O95299 355 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 FGGP02679 453 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 IL1R1P14778 569 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 SLC1A1P43005 524 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 EPHB4P54760 987 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 ERVK-24P63145 666 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 REEP2Q9BRK0 252 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 FAM49BQ9NUQ9 324 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 GIMAP4Q9NUV9 329 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 PCDHGB4Q9UN71 923 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 COPEO14579 308 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 CAND2O75155 1236 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 B3GAT3O94766 335 aa14.3□□□□□ -0.12
PDGFRB-201ENST00000261799 FTLP02792 175 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms