RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ASAP2O43150 1006 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 SPAG7O75391 227 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 PLS3P13797 630 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 ATF2P15336 505 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 RRM1P23921 792 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 CNGA1P29973 690 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 LACTB2Q53H82 288 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 KRT39Q6A163 491 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 BTNL9Q6UXG8 535 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 PIGWQ7Z7B1 504 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 FAM71AQ8IYT1 594 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 CDCA5Q96FF9 252 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 COL20A1Q9P218 1284 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 R3HDM2Q9Y2K5 976 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 SNX3O60493 162 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 PTPRAP18433 802 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 CDC25CP30307 473 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 GSCP56915 257 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 UGCGQ16739 394 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 PREPLQ4J6C6 727 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 KIFAP3Q92845 792 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 HERPUD2Q9BSE4 406 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.42■□□□□ 0.062e-6■■■■■ 31.8
SFSWAP-201ENST00000261674 TMX2Q9Y320 296 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 SOCS7O14512 581 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 SUN1O94901 812 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 GAS8O95995 478 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 ELF1P32519 619 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 SLC9A9Q8IVB4 645 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 CYP4X1Q8N118 509 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 KLRG1Q96E93 195 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 GTF3C4Q9UKN8 822 aa15.42■□□□□ 0.06
SFSWAP-201ENST00000261674 A8MUI8 341 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 IGF2BP3O00425 579 aaKnown RBP eCLIP15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 HNRNPDLO14979 420 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 RALAP11233 206 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 CD58P19256 250 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 MTMR1Q13613 665 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 MPP2Q14168 576 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 TMED2Q15363 201 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 TGS1Q96RS0 853 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 C11orf70Q9BRQ4 267 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 NKIRAS1Q9NYS0 192 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 IRF6O14896 467 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 GZMAP12544 262 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 RFX1P22670 979 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 TRAF1Q13077 416 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 FBXL13Q8NEE6 735 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 HAUS1Q96CS2 278 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 AAASQ9NRG9 546 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 RAB20Q9NX57 234 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 PIAS1O75925 651 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 TNNI1P19237 187 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 ADSSP30520 456 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 SLC8A1P32418 973 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 CDR2Q01850 454 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 NFIL3Q16649 462 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 SUPT20HL1Q3ZLR7 823 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 SPOPLQ6IQ16 392 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 SV2AQ7L0J3 742 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 ATG4CQ96DT6 458 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 FAM212AQ96EL1 285 aa15.41■□□□□ 0.06
SFSWAP-201ENST00000261674 ATP9AO75110 1047 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 DNAJC8O75937 253 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 GBP1P32455 592 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 PLCB3Q01970 1234 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 PARD3BQ8TEW8 1205 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 P3H4Q92791 437 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 KMT5AQ9NQR1 393 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 KCND2Q9NZV8 630 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 CSADQ9Y600 493 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 UBE4BO95155 1302 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 GGPS1O95749 300 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 SIX1Q15475 284 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 FKBP1CQ5VVH2 108 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 CROCCP2Q86T23 111 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 SHC3Q92529 594 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 CD101Q93033 1021 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 SNF8Q96H20 258 aa15.4■□□□□ 0.06
SFSWAP-201ENST00000261674 RASA4BC9J798 803 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 RASA4O43374 803 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 TTC4O95801 387 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 IFNB1P01574 187 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 GHRP10912 638 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 ITIH4Q14624 930 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 TREML2Q5T2D2 321 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 ACAD10Q6JQN1 1059 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 TRMT10CQ7L0Y3 403 aaKnown RBP15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 CYFIP1Q7L576 1253 aa15.39■□□□□ 0.06
SFSWAP-201ENST00000261674 SCYL3Q8IZE3 742 aa15.39■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms