RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LACTBL1A8MY62 500 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 IL18RAPO95256 599 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 ASS1P00966 412 aaKnown RBP24.02■■□□□ 1.44
SIX3-201ENST00000260653 MMEP08473 750 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 NFICP08651 508 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 HOXC8P31273 242 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 CDC42EP1Q00587 391 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 REM2Q8IYK8 340 aaPredicted RBP24.02■■□□□ 1.44
SIX3-201ENST00000260653 PCDHGC5Q9Y5F6 944 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 SCN10AQ9Y5Y9 1956 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 RARBP10826 455 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 ABCB4P21439 1286 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 CCND3P30281 292 aaPredicted RBP24.02■■□□□ 1.44
SIX3-201ENST00000260653 HOXA11P31270 313 aaPredicted RBP24.02■■□□□ 1.44
SIX3-201ENST00000260653 FMO1Q01740 532 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 ERCC6LQ2NKX8 1250 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 CATSPER4Q7RTX7 472 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 TMEM130Q8N3G9 435 aa24.02■■□□□ 1.44
SIX3-201ENST00000260653 UPF3AQ9H1J1 476 aaKnown RBP24.02■■□□□ 1.44
SIX3-201ENST00000260653 PUF60Q9UHX1 559 aaKnown RBP24.02■■□□□ 1.44
SIX3-201ENST00000260653 DARSP14868 501 aaKnown RBP24.01■■□□□ 1.43
SIX3-201ENST00000260653 ACO1P21399 889 aaKnown RBP24.01■■□□□ 1.43
SIX3-201ENST00000260653 APLP1P51693 650 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 ELF2Q15723 593 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 TMEM40Q8WWA1 233 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 ANKRD36BP1Q96IX9 119 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 ADPGKQ9BRR6 497 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 NCK2O43639 380 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 TNNC2P02585 160 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 PRKAR2AP13861 404 aaKnown RBP24.01■■□□□ 1.43
SIX3-201ENST00000260653 SLC10A6Q3KNW5 377 aa24.01■■□□□ 1.43
SIX3-201ENST00000260653 DDX1Q92499 740 aaKnown RBP24.01■■□□□ 1.43
SIX3-201ENST00000260653 MTG1Q9BT17 334 aaPredicted RBP24.01■■□□□ 1.43
SIX3-201ENST00000260653 CITO14578 2027 aa24■■□□□ 1.43
SIX3-201ENST00000260653 GRID2IPA4D2P6 1211 aa24■■□□□ 1.43
SIX3-201ENST00000260653 JADE1Q6IE81 842 aa24■■□□□ 1.43
SIX3-201ENST00000260653 KPNA6O60684 536 aa24■■□□□ 1.43
SIX3-201ENST00000260653 TBXAS1P24557 533 aaPredicted RBP24■■□□□ 1.43
SIX3-201ENST00000260653 NOP2P46087 812 aaKnown RBP24■■□□□ 1.43
SIX3-201ENST00000260653 CDR2Q01850 454 aa24■■□□□ 1.43
SIX3-201ENST00000260653 TRPC3Q13507 836 aa24■■□□□ 1.43
SIX3-201ENST00000260653 WHAMMP3Q1A5X7 153 aa24■■□□□ 1.43
SIX3-201ENST00000260653 ZNF710Q8N1W2 664 aa24■■□□□ 1.43
SIX3-201ENST00000260653 CD99L2Q8TCZ2 262 aa24■■□□□ 1.43
SIX3-201ENST00000260653 SPC25Q9HBM1 224 aa24■■□□□ 1.43
SIX3-201ENST00000260653 FTCDO95954 541 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 TMEM253P0C7T8 217 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 EIF4BP23588 611 aaKnown RBP23.99■■□□□ 1.43
SIX3-201ENST00000260653 CTNNBL1Q8WYA6 563 aaPredicted RBP23.99■■□□□ 1.43
SIX3-201ENST00000260653 THAP2Q9H0W7 228 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 SNX12Q9UMY4 172 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 EFCAB8A8MWE9 144 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 NPTXRO95502 500 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 GNAT1P11488 350 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 SNX17Q15036 470 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 NBPF20Q3BBV1 942 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 ARHGEF26Q96DR7 871 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 TLR10Q9BXR5 811 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 GOLPH3Q9H4A6 298 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 XPNPEP3Q9NQH7 507 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 PCDHB4Q9Y5E5 795 aa23.99■■□□□ 1.43
SIX3-201ENST00000260653 A0A0A6YYK5 440 aaPredicted RBP23.98■■□□□ 1.43
SIX3-201ENST00000260653 ZNF185O15231 689 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 FTLP02792 175 aaPredicted RBP23.98■■□□□ 1.43
SIX3-201ENST00000260653 MYCNP04198 464 aaPredicted RBP23.98■■□□□ 1.43
SIX3-201ENST00000260653 SGSM1Q2NKQ1 1148 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 TMEM270Q6UE05 265 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 CAPZA3Q96KX2 299 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 XYLT2Q9H1B5 865 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 ISCUQ9H1K1 167 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 SIX4Q9UIU6 781 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 KYAT1Q16773 422 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 ZNF699Q32M78 642 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 CEP112Q8N8E3 955 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 C1orf127Q8N9H9 656 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 ACAP3Q96P50 834 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 PSMB7Q99436 277 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 CFHR5Q9BXR6 569 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 EIF2AQ9BY44 585 aaKnown RBP23.98■■□□□ 1.43
SIX3-201ENST00000260653 OSGEPQ9NPF4 335 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 SRRDQ9UH36 339 aa23.98■■□□□ 1.43
SIX3-201ENST00000260653 NCANO14594 1321 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 MROH7Q68CQ1 1323 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 ANKRD62A6NC57 917 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 KRT19P08727 400 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 DCAF4L1Q3SXM0 396 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 RFFLQ8WZ73 363 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 NIF3L1Q9GZT8 377 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 ASB7Q9H672 318 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 GTF2IRD1Q9UHL9 959 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 PCDHB2Q9Y5E7 798 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 TRIP11Q15643 1979 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 CEP350Q5VT06 3117 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 POU5F1Q01860 360 aaKnown RBP23.97■■□□□ 1.43
SIX3-201ENST00000260653 SLC27A1Q6PCB7 646 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 TPCN2Q8NHX9 752 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 UBXN4Q92575 508 aa23.97■■□□□ 1.43
SIX3-201ENST00000260653 GRM5P41594 1212 aa23.96■■□□□ 1.43
SIX3-201ENST00000260653 NOTUMQ6P988 496 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms