RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 SLC4A7Q9Y6M7 1214 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 TEX33O43247 280 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 B4GALT3O60512 393 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 TNNC2P02585 160 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 MYL7Q01449 175 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 CXorf38Q8TB03 319 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 URGCPQ8TCY9 931 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 ZNF689Q96CS4 500 aaPredicted RBP17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 XPO4Q9C0E2 1151 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 SLC38A7Q9NVC3 462 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 LRRN2O75325 713 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 GJB5O95377 273 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 VNN1O95497 513 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 BIRC3Q13489 604 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 NR1I3Q14994 352 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 PTPN21Q16825 1174 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 FILIP1LQ4L180 1135 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 PAN2Q504Q3 1202 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 BEST2Q8NFU1 509 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 TAS1R2Q8TE23 839 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 SLC9A7Q96T83 725 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 HCSTQ9UBK5 93 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 CACNG4Q9UBN1 327 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 SIX4Q9UIU6 781 aa17.07■□□□□ 0.32
CCDC90B-201ENST00000260054 FNDC1Q4ZHG4 1894 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 PMM2O15305 246 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 XPOTO43592 962 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 N4BP1O75113 896 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 DDHD2O94830 711 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 CST3P01034 146 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 ITGB3P05106 788 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 ATP2A2P16615 1042 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 CYP3A5P20815 502 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 UBXN1Q04323 297 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 PHOSPHO2Q8TCD6 241 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 RSPH1Q8WYR4 309 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 CRACR2AQ9BSW2 395 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 COQ4Q9Y3A0 265 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 PDE4DIPQ5VU43 2346 aa17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 TDRD15B5MCY1 1934 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-201ENST00000260054 CASTOR2A6NHX0 329 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 PPEF2O14830 753 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 P4HA2O15460 535 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 RNASELQ05823 741 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 DSC1Q08554 894 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 TUSC3Q13454 348 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 HERC6Q8IVU3 1022 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 MRPL9Q9BYD2 267 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 TRIM5Q9C035 493 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
CCDC90B-201ENST00000260054 GTPBP10A4D1E9 387 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 PHACTR2O75167 634 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 HLA-DRAP01903 254 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 KRT19P08727 400 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 LRPAP1P30533 357 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 POLR2BP30876 1174 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 HTRA4P83105 476 aaPredicted RBP17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 KCNMA1Q12791 1236 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 NCOA4Q13772 614 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 COLGALT2Q8IYK4 626 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 FBXL13Q8NEE6 735 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 RABGGTAQ92696 567 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 ELMO3Q96BJ8 720 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 YME1L1Q96TA2 773 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 PAAF1Q9BRP4 392 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 NRDE2Q9H7Z3 1164 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 RAB20Q9NX57 234 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 DNAJB4Q9UDY4 337 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 ANO9A1A5B4 782 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 PIK3CAP42336 1068 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 CLCNKBP51801 687 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 MYL6P60660 151 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 C9orf57Q5W0N0 161 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 FAM109BQ6ICB4 259 aaPredicted RBP17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 GBP6Q6ZN66 633 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 PI4K2AQ9BTU6 479 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
CCDC90B-201ENST00000260054 PIRO00625 290 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 SLC9A1P19634 815 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 IGFBP6P24592 240 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 PBX1P40424 430 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 KLK7P49862 253 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 MRE11P49959 708 aa17.03■□□□□ 0.32
CCDC90B-201ENST00000260054 ZNF75DP51815 510 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms