RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 FOXN3O00409 490 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 EVI5O60447 810 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 LRRN2O75325 713 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 CLSTN1O94985 981 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 ASS1P00966 412 aaKnown RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 PLEKP08567 350 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 NFICP08651 508 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 NOP14P78316 857 aaKnown RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 SHC3Q92529 594 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 FAXDC2Q96IV6 333 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 PI4K2AQ9BTU6 479 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 GPR88Q9GZN0 384 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 HAUS4Q9H6D7 363 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 ERVK-5Q9HDB9 667 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 ITGA11Q9UKX5 1188 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 KIF2AO00139 706 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 TLR3O15455 904 aaKnown RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 XPOTO43592 962 aaKnown RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 RECQL4O94761 1208 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 LCA5LO95447 670 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 TUBB4AP04350 444 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 CKBP12277 381 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 CLCN1P35523 988 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 BFSP2Q13515 415 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 ZNF618Q5T7W0 954 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 TATDN2Q93075 761 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 KIF12Q96FN5 646 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 FAM84AQ96KN4 292 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 KREMEN1Q96MU8 473 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 CRISPLD2Q9H0B8 497 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 NXF3Q9H4D5 531 aaKnown RBP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.47
HLA-F-216ENST00000259951 IPPQ9Y573 584 aa18.01■□□□□ 0.47
HLA-F-216ENST00000259951 MEFVO15553 781 aaPredicted RBP18■□□□□ 0.47
HLA-F-216ENST00000259951 SGPL1O95470 568 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 TFRCP02786 760 aaKnown RBP18■□□□□ 0.47
HLA-F-216ENST00000259951 GHRP10912 638 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 ATICP31939 592 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 RAB27AP51159 221 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 CUL2Q13617 745 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 LPIN1Q14693 890 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 PTPN14Q15678 1187 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 ASTE1Q2TB18 679 aaPredicted RBP18■□□□□ 0.47
HLA-F-216ENST00000259951 FAM43BQ6ZT52 329 aaPredicted RBP18■□□□□ 0.47
HLA-F-216ENST00000259951 REXO1L1PQ8IX06 675 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 FAM71AQ8IYT1 594 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 ACRBPQ8NEB7 543 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 ARMC5Q96C12 935 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 CNTN3Q9P232 1028 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 PARP2Q9UGN5 583 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 PADI3Q9ULW8 664 aa18■□□□□ 0.47
HLA-F-216ENST00000259951 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-216ENST00000259951 KRT19P08727 400 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 SKIP12755 728 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 CD52P31358 61 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 USP8P40818 1118 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 MYL6P60660 151 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 PTK2Q05397 1052 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 SLC18A3Q16572 532 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 ZNF699Q32M78 642 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 ALKAL1Q6UXT8 129 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 KIAA1328Q86T90 577 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 C1orf127Q8N9H9 656 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 BEST2Q8NFU1 509 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 U2AF1L4Q8WU68 220 aaKnown RBP17.99■□□□□ 0.47
HLA-F-216ENST00000259951 KAT5Q92993 513 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.99■□□□□ 0.47
HLA-F-216ENST00000259951 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 APOL6Q9BWW8 343 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 AGO3Q9H9G7 860 aaKnown RBP17.99■□□□□ 0.47
HLA-F-216ENST00000259951 FAM105AQ9NUU6 356 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 DPP3Q9NY33 737 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 HES2Q9Y543 173 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 PCDHB2Q9Y5E7 798 aa17.99■□□□□ 0.47
HLA-F-216ENST00000259951 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-216ENST00000259951 CCDC85CA6NKD9 419 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 CAPN2P17655 700 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 BPIFB4P59827 614 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 YWHAEP62258 255 aaKnown RBP17.98■□□□□ 0.47
HLA-F-216ENST00000259951 RBP5P82980 135 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
HLA-F-216ENST00000259951 ARHGAP29Q52LW3 1261 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 DNTTIP2Q5QJE6 756 aaKnown RBP17.98■□□□□ 0.47
HLA-F-216ENST00000259951 C10orf76Q5T2E6 689 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 ZNF662Q6ZS27 426 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 GPIHBP1Q8IV16 184 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 SMG8Q8ND04 991 aaKnown RBP17.98■□□□□ 0.47
HLA-F-216ENST00000259951 NIF3L1Q9GZT8 377 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 NUB1Q9Y5A7 615 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 CD4P01730 458 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 ITGB3P05106 788 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-216ENST00000259951 P4HA1P13674 534 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 KCNE1P15382 129 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 SELPP16109 830 aa17.98■□□□□ 0.47
HLA-F-216ENST00000259951 AKAP5P24588 427 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms