RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 COQ4Q9Y3A0 265 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 GOLGA6L9A6NEM1 432 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ZNF263O14978 683 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 CSDE1O75534 798 aaKnown RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 RPS6KA5O75582 802 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 SERPING1P05155 500 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 DLATP10515 647 aaKnown RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 DNAJB2P25686 324 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 CETN1Q12798 172 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 NFX1Q12986 1120 aaKnown RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 HSP90AA2PQ14568 343 aaPredicted RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ASIC2Q16515 512 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ASTE1Q2TB18 679 aaPredicted RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 EEF1DP3Q658K8 133 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 C15orf39Q6ZRI6 1047 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 USP37Q86T82 979 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 HERC6Q8IVU3 1022 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 SPAG5Q96R06 1193 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 OSMRQ99650 979 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 PBX4Q9BYU1 374 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 GPR88Q9GZN0 384 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 AGO3Q9H9G7 860 aaKnown RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 PDE11AQ9HCR9 933 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 DNAJC12Q9UKB3 198 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 PADI3Q9ULW8 664 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 DAAM1Q9Y4D1 1078 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 SSU72P8A0A1W2PR75 194 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 GPR182O15218 404 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 OGTO15294 1046 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 GPR32O75388 356 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 TNFSF9P41273 254 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 KIF11P52732 1056 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 RABGGTBP53611 331 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ZNF697Q5TEC3 545 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 FAM43BQ6ZT52 329 aaPredicted RBP18.84■□□□□ 0.61
SRSF1-201ENST00000258962 SV2AQ7L0J3 742 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 IRF2BP2Q7Z5L9 587 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ZNF410Q86VK4 478 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ARHGEF19Q8IW93 802 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 BRSK2Q8IWQ3 736 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 NLRP7Q8WX94 980 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 TIFAQ96CG3 184 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 CCDC42Q96M95 316 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 TCHPQ9BT92 498 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 FTHL17Q9BXU8 183 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 ADAMTS10Q9H324 1103 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 TNFSF13BQ9Y275 285 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 PCDHA11Q9Y5I1 949 aa18.84■□□□□ 0.61
SRSF1-201ENST00000258962 F8VZ95 297 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 LCA5LO95447 670 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 PNMA6AP0CW24 399 aaPredicted RBP18.83■□□□□ 0.6
SRSF1-201ENST00000258962 PBX2P40425 430 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 ARHGAP25P42331 645 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 DEFB103AP81534 67 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 ZNF568Q3ZCX4 644 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 LMBRD2Q68DH5 695 aaPredicted RBP18.83■□□□□ 0.6
SRSF1-201ENST00000258962 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.83■□□□□ 0.64e-10■■■■■ 56.8
SRSF1-201ENST00000258962 CDR2LQ86X02 465 aaPredicted RBP18.83■□□□□ 0.6
SRSF1-201ENST00000258962 DEFB123Q8N688 67 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 TAS1R2Q8TE23 839 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 PRIMPOLQ96LW4 560 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 STK33Q9BYT3 514 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 CDT1Q9H211 546 aa18.83■□□□□ 0.6
SRSF1-201ENST00000258962 NOC2LQ9Y3T9 749 aaKnown RBP18.83■□□□□ 0.6
SRSF1-201ENST00000258962 TULP1O00294 542 aaPredicted RBP18.82■□□□□ 0.6
SRSF1-201ENST00000258962 TLL1O43897 1013 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 ABL1P00519 1130 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 RFX1P22670 979 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
SRSF1-201ENST00000258962 ARID5AQ03989 594 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 DRAP1Q14919 205 aaPredicted RBP18.82■□□□□ 0.6
SRSF1-201ENST00000258962 TDRD12Q587J7 1177 aaKnown RBP18.82■□□□□ 0.6
SRSF1-201ENST00000258962 SRGAP1Q7Z6B7 1085 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 FBXL13Q8NEE6 735 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 FNBP1Q96RU3 617 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 CGRRF1Q99675 332 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 GCOM2Q9BZD3 368 aaPredicted RBP18.82■□□□□ 0.6
SRSF1-201ENST00000258962 LZTFL1Q9NQ48 299 aa18.82■□□□□ 0.6
SRSF1-201ENST00000258962 CPSF3Q9UKF6 684 aaKnown RBP18.82■□□□□ 0.6
SRSF1-201ENST00000258962 LAMA3Q16787 3333 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 TMEM265A0A087WTH1 108 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 RBAK-RBAKDNI3L0D1 243 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 ENPP3O14638 875 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 TSPAN1O60635 241 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 C4BPAP04003 597 aaKnown RBP18.81■□□□□ 0.6
SRSF1-201ENST00000258962 PRKCIP41743 596 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 ETF1P62495 437 aaKnown RBP18.81■□□□□ 0.6
SRSF1-201ENST00000258962 CYP27A1Q02318 531 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 KLHL30Q0D2K2 578 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 ZACNQ401N2 412 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 FAM117BQ6P1L5 589 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 CEP120Q8N960 986 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 PDZD7Q9H5P4 517 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 SLC28A3Q9HAS3 691 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 RAB20Q9NX57 234 aa18.81■□□□□ 0.6
SRSF1-201ENST00000258962 ST3GAL5Q9UNP4 418 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms