RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 BRD2P25440 801 aaKnown RBP18.04■□□□□ 0.48
ACTN4-201ENST00000252699 SLC12A3P55017 1021 aa18.04■□□□□ 0.48
ACTN4-201ENST00000252699 CDK17Q00537 523 aa18.04■□□□□ 0.48
ACTN4-201ENST00000252699 ZC3H18Q86VM9 953 aaKnown RBP18.04■□□□□ 0.48
ACTN4-201ENST00000252699 AMIGO3Q86WK7 504 aa18.04■□□□□ 0.48
ACTN4-201ENST00000252699 CAMKK2Q96RR4 588 aa18.04■□□□□ 0.48
ACTN4-201ENST00000252699 FDXACB1Q9BRP7 624 aaPredicted RBP18.04■□□□□ 0.48
ACTN4-201ENST00000252699 CNOT10Q9H9A5 744 aaKnown RBP18.04■□□□□ 0.48
ACTN4-201ENST00000252699 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.04■□□□□ 0.48
ACTN4-201ENST00000252699 CSDE1O75534 798 aaKnown RBP18.03■□□□□ 0.48
ACTN4-201ENST00000252699 LAMTOR4Q0VGL1 99 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 EFCAB13Q8IY85 973 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 ZNF384Q8TF68 577 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.03■□□□□ 0.485e-6■□□□□ 9.6
ACTN4-201ENST00000252699 CYP39A1Q9NYL5 469 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 SMARCAL1Q9NZC9 954 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 TLK1Q9UKI8 766 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 PSMD10O75832 226 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 GSTA1P08263 222 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 GSTA2P09210 222 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 EPHB1P54762 984 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 DCAF4L1Q3SXM0 396 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 SV2AQ7L0J3 742 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 PPFIBP2Q8ND30 876 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 CYP3A7-CYP3A51PA0A087WV96 503 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 GRAP2O75791 330 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 MAPTP10636 758 aaKnown RBP18.03■□□□□ 0.48
ACTN4-201ENST00000252699 CYP3A7P24462 503 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 RASSF2P50749 326 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 COG7P83436 770 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 PPIL2Q13356 520 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 WNT7AO00755 349 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 TADA2AO75478 443 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 SUN1O94901 812 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 CYP24A1Q07973 514 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 DGKZQ13574 1117 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 SV2CQ496J9 727 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 UBQLN1Q9UMX0 589 aaKnown RBP18.03■□□□□ 0.48
ACTN4-201ENST00000252699 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
ACTN4-201ENST00000252699 H3BRJ5 948 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 BNIP3LO60238 219 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 SH3BP5O60239 455 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 ROR1Q01973 937 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 RPS6KA2Q15349 733 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 IL17AQ16552 155 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 NXNQ6DKJ4 435 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 MOB2Q70IA6 237 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 RIOX2Q8IUF8 465 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 PRDM5Q9NQX1 630 aaPredicted RBP18.02■□□□□ 0.48
ACTN4-201ENST00000252699 INTUQ9ULD6 942 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 TARSL2A2RTX5 802 aaKnown RBP18.02■□□□□ 0.48
ACTN4-201ENST00000252699 SGPL1O95470 568 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 THPOP40225 353 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 PIGHQ14442 188 aaPredicted RBP18.02■□□□□ 0.48
ACTN4-201ENST00000252699 SPATA2LQ8IUW3 424 aaPredicted RBP18.02■□□□□ 0.48
ACTN4-201ENST00000252699 UBA3Q8TBC4 463 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 PURBQ96QR8 312 aaKnown RBP18.02■□□□□ 0.48
ACTN4-201ENST00000252699 THAP2Q9H0W7 228 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 ABHD16BQ9H3Z7 469 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 GTF3C4Q9UKN8 822 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 MANSC4A6NHS7 340 aaPredicted RBP18.02■□□□□ 0.48
ACTN4-201ENST00000252699 PMS2P54278 862 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 RCOR2Q8IZ40 523 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 ATL2Q8NHH9 583 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 SPIRE2Q8WWL2 714 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 DPP3Q9NY33 737 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 DUSP10Q9Y6W6 482 aa18.02■□□□□ 0.48
ACTN4-201ENST00000252699 SNHG28P0DPA3 235 aa18.02■□□□□ 0.47
ACTN4-201ENST00000252699 EXOC4Q96A65 974 aa18.02■□□□□ 0.47
ACTN4-201ENST00000252699 GGCXP38435 758 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 KRT17Q04695 432 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 DEPDC1BQ8WUY9 529 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 SETD4Q9NVD3 440 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 GRIK1P39086 918 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 CDR2Q01850 454 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 HP1BP3Q5SSJ5 553 aaPredicted RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 IZUMO3Q5VZ72 239 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 SKA2Q8WVK7 121 aaPredicted RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 TRIM62Q9BVG3 475 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 LACRTQ9GZZ8 138 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 VTA1Q9NP79 307 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 ARHGAP20Q9P2F6 1191 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 GTPBP10A4D1E9 387 aaKnown RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 GOLGA8CPA6NN73 597 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 STAG3L1P0CL83 205 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 TAF6P49848 677 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 REPS2Q8NFH8 660 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 TRAPPC12Q8WVT3 735 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 KLRG1Q96E93 195 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 RBM12Q9NTZ6 932 aaKnown RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 AFDNP55196 1824 aaKnown RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 IQANK1A0A1B0GTG1 560 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 ZC3H11AO75152 810 aaKnown RBP eCLIP18.01■□□□□ 0.476e-11■■□□□ 12.2
ACTN4-201ENST00000252699 PCSK1P29120 753 aa18.01■□□□□ 0.47
ACTN4-201ENST00000252699 GNL1P36915 607 aaPredicted RBP18.01■□□□□ 0.47
ACTN4-201ENST00000252699 SPATS2Q86XZ4 545 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms