RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 SENP7Q9BQF6 1050 aa12.9□□□□□ -0.34
ZKSCAN3-201ENST00000252211 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.34
ZKSCAN3-201ENST00000252211 ABI2Q9NYB9 513 aaPredicted RBP12.9□□□□□ -0.34
ZKSCAN3-201ENST00000252211 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.34
ZKSCAN3-201ENST00000252211 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
ZKSCAN3-201ENST00000252211 KRT37O76014 449 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ROR1Q01973 937 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TRAPPC11Q7Z392 1133 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 FAM71BQ8TC56 605 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TMEM39AQ9NV64 488 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 NAGPAQ9UK23 515 aa12.9□□□□□ -0.35
ZKSCAN3-201ENST00000252211 FAM86B1E9PN63 330 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 RASGRF2O14827 1237 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ZC3H11AO75152 810 aaKnown RBP eCLIP12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 HMBSP08397 361 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 FAM86B2P0C5J1 330 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PSEN2P49810 448 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PSMD6Q15008 389 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CABYRO75952 493 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 URODP06132 367 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 RARRES1P49788 294 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GNGT1P63211 74 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TAF1BQ53T94 588 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 EFHC1Q5JVL4 640 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GPAT2Q6NUI2 795 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 NOP9Q86U38 636 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 C10orf67Q8IYJ2 551 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 DNAJB3Q8WWF6 145 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 BCAP29Q9UHQ4 241 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 APOL1O14791 398 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 MX2P20592 715 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 RAB27AP51159 221 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CAV1Q03135 178 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 DEUP1Q05D60 604 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ENGASEQ8NFI3 743 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ITIH6Q6UXX5 1313 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 NFAT5O94916 1531 aa12.89□□□□□ -0.35
ZKSCAN3-201ENST00000252211 IQANK1A0A1B0GTG1 560 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CYTH3O43739 400 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 FKTNO75072 461 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CHRNA3P32297 505 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GALCP54803 685 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ARHGAP15Q53QZ3 475 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ZNF720Q7Z2F6 126 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 VSIG10LQ86VR7 867 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 SLC5A5Q92911 643 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 DFFAO00273 331 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GTF2H1P32780 548 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 RBBP5Q15291 538 aaKnown RBP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 IRAK4Q9NWZ3 460 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ARHGAP18Q8N392 663 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 KANSL3Q9P2N6 904 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GHRP10912 638 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 IFNAR2P48551 515 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 DRP2Q13474 957 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CUL2Q13617 745 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CACNA2D3Q8IZS8 1091 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 SCG3Q8WXD2 468 aaKnown RBP12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 MTMR12Q9C0I1 747 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
ZKSCAN3-201ENST00000252211 ACSL3O95573 720 aa12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 PRAMEP78395 509 aa12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 KLHDC7AQ5VTJ3 777 aa12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
ZKSCAN3-201ENST00000252211 NR2E3Q9Y5X4 410 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms