RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 MFSD14CQ5VZR4 134 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 CDCA2Q69YH5 1023 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 IQCEQ6IPM2 695 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 TMEM117Q9H0C3 514 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 CCDC113Q9H0I3 377 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 GTPBP10A4D1E9 387 aaKnown RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 MAGEB2O15479 319 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 EXTL3O43909 919 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 HMGCRP04035 888 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 HOXD8P13378 290 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 TNNI1P19237 187 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 TNFSF9P41273 254 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 PRMT2P55345 433 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 SLC8A3P57103 927 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 CETN1Q12798 172 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 FSCN1Q16658 493 aaKnown RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 DPY19L2P1Q6NXN4 242 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 DNAJC14Q6Y2X3 702 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 C2orf40Q9H1Z8 148 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 PLEKHA4Q9H4M7 779 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 ACTR5Q9H9F9 607 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 KLC4Q9NSK0 619 aa13.18□□□□□ -0.3
SUGP1-201ENST00000247001 RBAKQ9NYW8 714 aaPredicted RBP13.18□□□□□ -0.3
SUGP1-201ENST00000247001 GOLGA6BA6NDN3 693 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 AKR1B10O60218 316 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 GGCXP38435 758 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 ASIC2Q16515 512 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 ALS2CLQ60I27 953 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 SLC35F6Q8N357 371 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 U2AF1L4Q8WU68 220 aaKnown RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 TMEM174Q8WUU8 243 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 FBXL18Q96ME1 805 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 ACO2Q99798 780 aaKnown RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 BATF3Q9NR55 127 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 TRIM10Q9UDY6 481 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 COL1A2P08123 1366 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 A0A0B4J269 797 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 COQ9O75208 318 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 RASSF9O75901 435 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 F2P00734 622 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 FGFR4P22455 802 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 PHKA2P46019 1235 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 KIF11P52732 1056 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 PTENP60484 403 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 GFPT1Q06210 699 aaPredicted RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 IFFO1Q0D2I5 559 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 CPB2Q96IY4 423 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 MFSD14AQ96MC6 490 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 TMEM106CQ9BVX2 250 aa13.17□□□□□ -0.3
SUGP1-201ENST00000247001 REXO2Q9Y3B8 237 aaKnown RBP13.17□□□□□ -0.3
SUGP1-201ENST00000247001 MAPK13O15264 365 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 TOM1L1O75674 476 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 GFPT2O94808 682 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 PIGRP01833 764 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 CYBAP13498 195 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 SLC8A1P32418 973 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 CDR1P51861 262 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 GNGT1P63211 74 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 ACTN3Q08043 901 aaPredicted RBP13.16□□□□□ -0.3
SUGP1-201ENST00000247001 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 HIC1Q14526 733 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 ZNF568Q3ZCX4 644 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 ATF7IP2Q5U623 682 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 ZNF662Q6ZS27 426 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 KIAA1328Q86T90 577 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 EHBP1Q8NDI1 1231 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 EDEM3Q9BZQ6 932 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 UBE2TQ9NPD8 197 aaPredicted RBP13.16□□□□□ -0.3
SUGP1-201ENST00000247001 APEX2Q9UBZ4 518 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
SUGP1-201ENST00000247001 GOLGA6L7A0A1B0GV03 622 aa13.15□□□□□ -0.3
SUGP1-201ENST00000247001 AGPSO00116 658 aa13.15□□□□□ -0.3
SUGP1-201ENST00000247001 ASAP2O43150 1006 aa13.15□□□□□ -0.3
SUGP1-201ENST00000247001 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
SUGP1-201ENST00000247001 SCP2P22307 547 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms