RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 UVRAGQ9P2Y5 699 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 PCDHB4Q9Y5E5 795 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 CYP1A1P04798 512 aaPredicted RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 ITGA4P13612 1032 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 MAPK4P31152 587 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 TNNT3P45378 269 aaPredicted RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 MESDQ14696 234 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 DUOXA2Q1HG44 320 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 CST9Q5W186 159 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 TMEM270Q6UE05 265 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 UBR7Q8N806 425 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 CEP120Q8N960 986 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 A0A087WZ62 844 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 ZSCAN5CA6NGD5 496 aaPredicted RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 TMEM110-MUSTN1A8MSY1 372 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 H3BRB1 525 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 KRIT1O00522 736 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 COMTP21964 271 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 GABPB1Q06547 395 aaPredicted RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 ACVR2BQ13705 512 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 AMHR2Q16671 573 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 FAM187BQ17R55 369 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 IFNLR1Q8IU57 520 aaPredicted RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 IFT20Q8IY31 132 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 FDXACB1Q9BRP7 624 aaPredicted RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 CDT1Q9H211 546 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 ABHD16BQ9H3Z7 469 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 PLEKHA4Q9H4M7 779 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 TUT1Q9H6E5 874 aaKnown RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 EPB41L5Q9HCM4 733 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 PRMT7Q9NVM4 692 aaPredicted RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 CNOT8Q9UFF9 292 aaKnown RBP19.79■□□□□ 0.76
HOXC11-201ENST00000243082 COL1A2P08123 1366 aa19.79■□□□□ 0.76
HOXC11-201ENST00000243082 MIF4GDA9UHW6 222 aaKnown RBP19.78■□□□□ 0.76
HOXC11-201ENST00000243082 CCDC188H7C350 402 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 CSDE1O75534 798 aaKnown RBP19.78■□□□□ 0.76
HOXC11-201ENST00000243082 FGGP02679 453 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 CFHP08603 1231 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 HOXD8P13378 290 aaPredicted RBP19.78■□□□□ 0.76
HOXC11-201ENST00000243082 PHKA2P46019 1235 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 MYL6P60660 151 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 OSTNP61366 133 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 GUCY2DQ02846 1103 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 MTHFD1LQ6UB35 978 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 EFCAB13Q8IY85 973 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 MCOLN2Q8IZK6 566 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 RBBP8NLQ8NC74 664 aaPredicted RBP19.78■□□□□ 0.76
HOXC11-201ENST00000243082 CPA5Q8WXQ8 436 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 KRT35Q92764 455 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 CD101Q93033 1021 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 BTBD6Q96KE9 485 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 RNPC3Q96LT9 517 aaKnown RBP19.78■□□□□ 0.76
HOXC11-201ENST00000243082 ZCCHC17Q9NP64 241 aaKnown RBP19.78■□□□□ 0.76
HOXC11-201ENST00000243082 HPCAL4Q9UM19 191 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 GPR25O00155 361 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 B4GALT4O60513 344 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 MMP3P08254 477 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 PEX5P50542 639 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 TMEM192Q8IY95 271 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 CYFIP2Q96F07 1278 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 ZSWIM1Q9BR11 485 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 IMPG2Q9BZV3 1241 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 PRDM10Q9NQV6 1147 aa19.78■□□□□ 0.76
HOXC11-201ENST00000243082 ESYT3A0FGR9 886 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 SLC15A5A6NIM6 579 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 SART1O43290 800 aaKnown RBP19.77■□□□□ 0.76
HOXC11-201ENST00000243082 ADCY6O43306 1168 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 VTNP04004 478 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 GNA15P30679 374 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 MARCKSL1P49006 195 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 CARSP49589 748 aaKnown RBP19.77■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF132P52740 706 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 EPHB4P54760 987 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 CENPCQ03188 943 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF211Q13398 564 aaPredicted RBP19.77■□□□□ 0.76
HOXC11-201ENST00000243082 TMEM132AQ24JP5 1023 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 IQSEC1Q6DN90 963 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 CPNE8Q86YQ8 564 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 ZBTB9Q96C00 473 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 PPP1R16BQ96T49 567 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 ZHX1Q9UKY1 873 aaPredicted RBP19.77■□□□□ 0.76
HOXC11-201ENST00000243082 AKT3Q9Y243 479 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 NR2E1Q9Y466 385 aa19.77■□□□□ 0.76
HOXC11-201ENST00000243082 A0A0U1RQG5 324 aaPredicted RBP19.76■□□□□ 0.75
HOXC11-201ENST00000243082 TFAMQ00059 246 aaKnown RBP19.76■□□□□ 0.75
HOXC11-201ENST00000243082 SGSM1Q2NKQ1 1148 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 MARCH8Q5T0T0 291 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 NAA35Q5VZE5 725 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 UBL4BQ8N7F7 174 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 UBE2Q2Q8WVN8 375 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 CASKIN2Q8WXE0 1202 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 DDX47Q9H0S4 455 aaKnown RBP19.76■□□□□ 0.75
HOXC11-201ENST00000243082 WNT8AQ9H1J5 351 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 AVENQ9NQS1 362 aaPredicted RBP19.76■□□□□ 0.75
HOXC11-201ENST00000243082 POLR3GO15318 223 aaPredicted RBP19.76■□□□□ 0.75
HOXC11-201ENST00000243082 CLSTN1O94985 981 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 TMOD1P28289 359 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 GPS2Q13227 327 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 EMBQ6PCB8 327 aa19.76■□□□□ 0.75
HOXC11-201ENST00000243082 SND1Q7KZF4 910 aaKnown RBP eCLIP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms