RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CCDC151A5D8V7 595 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 C2orf71A6NGG8 1288 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 AURKAO14965 403 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 TGFB1P01137 390 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 SERPINB2P05120 415 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 GYS1P13807 737 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 CDC25AP30304 524 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 GFRA1P56159 465 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 CDK17Q00537 523 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 IKZF1Q13422 519 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 PDIA5Q14554 519 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 MEA1Q16626 185 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 TXNRD1Q16881 649 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 LETM2Q2VYF4 491 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
CXCR4-201ENST00000241393 ANGEL2Q5VTE6 544 aaKnown RBP8.68□□□□□ -1.02
CXCR4-201ENST00000241393 CYP2R1Q6VVX0 501 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 MSL3Q8N5Y2 521 aaKnown RBP8.68□□□□□ -1.02
CXCR4-201ENST00000241393 TBC1D16Q8TBP0 767 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 CEP95Q96GE4 821 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 NAP1L4Q99733 375 aaKnown RBP8.68□□□□□ -1.02
CXCR4-201ENST00000241393 NAPGQ99747 312 aaPredicted RBP8.68□□□□□ -1.02
CXCR4-201ENST00000241393 COA1Q9GZY4 146 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 HAUS4Q9H6D7 363 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 LZTFL1Q9NQ48 299 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 MTMR4Q9NYA4 1195 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 SWAP70Q9UH65 585 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 SLC5A6Q9Y289 635 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 LUC7L2Q9Y383 392 aaKnown RBP8.68□□□□□ -1.02
CXCR4-201ENST00000241393 UBR3Q6ZT12 1888 aa8.68□□□□□ -1.02
CXCR4-201ENST00000241393 MYH1P12882 1939 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 A0A1W2PQJ5 194 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 PP2D1A8MPX8 630 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
CXCR4-201ENST00000241393 NDUFA10O95299 355 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
CXCR4-201ENST00000241393 GSTM1P09488 218 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 PDHBP11177 359 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 ECI1P42126 302 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 ARHGAP25P42331 645 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 CTSKP43235 329 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 GABREP78334 506 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 KRT83P78385 493 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 EGR3Q06889 387 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 TERF2Q15554 542 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 QSER1Q2KHR3 1735 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 TMEM266Q2M3C6 531 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 ZNF569Q5MCW4 686 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 CC2D1AQ6P1N0 951 aaPredicted RBP8.67□□□□□ -1.02
CXCR4-201ENST00000241393 KIAA0907Q7Z7F0 614 aaPredicted RBP8.67□□□□□ -1.02
CXCR4-201ENST00000241393 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 CSGALNACT2Q8N6G5 542 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 TBCKQ8TEA7 893 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 MTMR9Q96QG7 549 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 ERGIC2Q96RQ1 377 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 CDADC1Q9BWV3 514 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 ARFGAP3Q9NP61 516 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 RAB21Q9UL25 225 aa8.67□□□□□ -1.02
CXCR4-201ENST00000241393 EPN1Q9Y6I3 576 aaPredicted RBP8.67□□□□□ -1.02
CXCR4-201ENST00000241393 TTC26A0AVF1 554 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 TBC1D8O95759 1140 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 GOLGA8HP0CJ92 632 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 CYLC1P35663 651 aaPredicted RBP8.66□□□□□ -1.02
CXCR4-201ENST00000241393 ADCY7P51828 1080 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 ASIC1P78348 528 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 ZBED6P86452 979 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 DUSP4Q13115 394 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 SEPT2Q15019 361 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 SLC4A8Q2Y0W8 1093 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 TEX35Q5T0J7 233 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 CENPPQ6IPU0 288 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 UNC13DQ70J99 1090 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 MAMDC2Q7Z304 686 aaPredicted RBP8.66□□□□□ -1.02
CXCR4-201ENST00000241393 VSIG10LQ86VR7 867 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 MSANTD4Q8NCY6 345 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 KISS1RQ969F8 398 aaPredicted RBP8.66□□□□□ -1.02
CXCR4-201ENST00000241393 PIGSQ96S52 555 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 TUBGCP2Q9BSJ2 902 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 MMTAG2Q9BU76 263 aaKnown RBP8.66□□□□□ -1.02
CXCR4-201ENST00000241393 SLC12A9Q9BXP2 914 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 FOXP3Q9BZS1 431 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 UBXN6Q9BZV1 441 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 TTYH3Q9C0H2 523 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 ATP13A1Q9HD20 1204 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 ZNHIT6Q9NWK9 470 aaKnown RBP8.66□□□□□ -1.02
CXCR4-201ENST00000241393 POLLQ9UGP5 575 aa8.66□□□□□ -1.02
CXCR4-201ENST00000241393 TRIM49BA6NDI0 452 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 PSMD14O00487 310 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 MEFVO15553 781 aaPredicted RBP8.65□□□□□ -1.02
CXCR4-201ENST00000241393 RFPL3O75679 317 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 GCFC2P16383 781 aaKnown RBP8.65□□□□□ -1.02
CXCR4-201ENST00000241393 KCNAB2Q13303 367 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 CALCRLQ16602 461 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
CXCR4-201ENST00000241393 ACBD5Q5T8D3 534 aaPredicted RBP8.65□□□□□ -1.02
CXCR4-201ENST00000241393 SLC35F6Q8N357 371 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms