RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 SCFD2Q8WU76 684 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 DCUN1D1Q96GG9 259 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 PCDHB8Q9UN66 801 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 BCS1LQ9Y276 419 aa7.09□□□□□ -1.27
CSMD2-201ENST00000241312 C3orf70A6NLC5 250 aaPredicted RBP7.09□□□□□ -1.28
CSMD2-201ENST00000241312 HDDC2Q7Z4H3 204 aa7.09□□□□□ -1.28
CSMD2-201ENST00000241312 RSPH1Q8WYR4 309 aa7.09□□□□□ -1.28
CSMD2-201ENST00000241312 SENP7Q9BQF6 1050 aa7.09□□□□□ -1.28
CSMD2-201ENST00000241312 ZSCAN32Q9NX65 697 aa7.09□□□□□ -1.28
CSMD2-201ENST00000241312 PCSK1NQ9UHG2 260 aa7.09□□□□□ -1.28
CSMD2-201ENST00000241312 ASXL3Q9C0F0 2248 aa7.09□□□□□ -1.28
CSMD2-201ENST00000241312 TTC33Q6PID6 262 aaPredicted RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 MIGA2Q7L4E1 593 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 CLEC4FQ8N1N0 589 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 C1orf54Q8WWF1 131 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PGBD4Q96DM1 585 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 EPS8L2Q9H6S3 715 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 COPB2P35606 906 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TTC23LQ6PF05 361 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TRMT2AQ8IZ69 625 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 RMDN1Q96DB5 314 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 LY9Q9HBG7 655 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 BARHL2Q9NY43 387 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 GGT7Q9UJ14 662 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 CLRN2A0PK11 232 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 SSTR3P32745 418 aaPredicted RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PLA2G4AP47712 749 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 NUP107P57740 925 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PSMC5P62195 406 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 KBTBD12Q3ZCT8 623 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TMA16Q96EY4 203 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ATXN7L3BQ96GX2 97 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM8Q9BZR9 551 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PLEKHA5Q9HAU0 1116 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF302Q9NR11 478 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TRPC5OSA6NMA1 111 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 RTN2O75298 545 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 BAG6P46379 1132 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 RAB14P61106 215 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 SNRNP48Q6IEG0 339 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 RNF135Q8IUD6 432 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 SCN4BQ8IWT1 228 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 RIBC1Q8N443 379 aaPredicted RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 AGR3Q8TD06 166 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 FAM213AQ9BRX8 229 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ZNF521Q96K83 1311 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 SNTNA6NMZ2 147 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 APRTP07741 180 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 HMOX2P30519 316 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 LVRNQ6Q4G3 990 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PTPRN2Q92932 1015 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 C19orf60Q96EN9 201 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ARHGEF38Q9NXL2 777 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 IL1RAPL1Q9NZN1 696 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 SUPT3HB4E1H0 165 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 H2AFYO75367 372 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 APBA3O96018 575 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TXNRD1Q16881 649 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 EEPD1Q7L9B9 569 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 FRMD8Q9BZ67 464 aaPredicted RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 JPH1Q9HDC5 661 aaPredicted RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 APEX2Q9UBZ4 518 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 NRKQ7Z2Y5 1582 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 UTYO14607 1347 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ITIH6Q6UXX5 1313 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 EMSYQ7Z589 1322 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM49P0CI25 452 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TRIM49CP0CI26 452 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ADORA2BP29275 332 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 EIF3EP60228 445 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PTK7Q13308 1070 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PDK1Q15118 436 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TBC1D10CQ8IV04 446 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 C17orf80Q9BSJ5 609 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 ALG13Q9NP73 1137 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PCMTD2Q9NV79 361 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 WDR35Q9P2L0 1181 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 LIMA1Q9UHB6 759 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 AMACRQ9UHK6 382 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TBL3Q12788 808 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 GPD1LQ8N335 351 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 TLR2O60603 784 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 QARSP47897 775 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 MEI1Q5TIA1 1274 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 HIC2Q96JB3 615 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 H0YC42 278 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 PKN3Q6P5Z2 889 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 FOXP4Q8IVH2 680 aaPredicted RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 STRBPQ96SI9 672 aaKnown RBP7.08□□□□□ -1.28
CSMD2-201ENST00000241312 OSBPL8Q9BZF1 889 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 DNAJC13O75165 2243 aa7.08□□□□□ -1.28
CSMD2-201ENST00000241312 CCT8L1PA6NM43 557 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 PRR29P0C7W0 189 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 ITIH2P19823 946 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 MDH1BQ5I0G3 518 aa7.07□□□□□ -1.28
CSMD2-201ENST00000241312 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms